RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PAEPP09466 180 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 OR56A5P0C7T3 313 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 TFE3P19532 575 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 DSG3P32926 999 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 RANBP1P43487 201 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PIK3CGP48736 1102 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 SLC12A3P55017 1021 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NAA20P61599 178 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 DDR2Q16832 855 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PGS1Q32NB8 556 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 SPOCD1Q6ZMY3 1216 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM86AQ8N2M4 240 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 MDM1Q8TC05 714 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 VPS33AQ96AX1 596 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 DEPDC7Q96QD5 511 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NFKBIZQ9BYH8 718 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 IL22Q9GZX6 179 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 GBA2Q9HCG7 927 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NT5MQ9NPB1 228 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 TMCO1Q9UM00 188 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 FAM220BPB1ANY3 271 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 H3BMM5 538 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NQO1P15559 274 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 IFNGR2P38484 337 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 RARRES1P49788 294 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 ERFP50548 548 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 INHBEP58166 350 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 MYL6P60660 151 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 YWHAZP63104 245 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PRKAA1Q13131 559 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 EZH2Q15910 746 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NFIL3Q16649 462 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 OVOS1Q6IE37 1185 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 CCDC103Q8IW40 242 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 TAS1R2Q8TE23 839 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 EPS8L3Q8TE67 593 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 FDXACB1Q9BRP7 624 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 SLC40A1Q9NP59 571 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 THAP1Q9NVV9 213 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 GPRC5DQ9NZD1 345 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NCF1BA6NI72 391 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NCF1CA8MVU1 366 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NCF1P14598 390 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 FGFR2P21802 821 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 AQP5P55064 265 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 MGAT5Q09328 741 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NAB1Q13506 487 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 POU6F1Q14863 301 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 GRIK4Q16099 956 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 CEP78Q5JTW2 689 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 FAM131BQ86XD5 332 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF786Q8N393 782 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 SYTL5Q8TDW5 730 aaPredicted RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 ATG4AQ8WYN0 398 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 LRRC39Q96DD0 335 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PAPOLBQ9NRJ5 636 aaKnown RBP5.59□□□□□ -1.51
VPS13C-204ENST00000395898 TAGLN3Q9UI15 199 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
VPS13C-204ENST00000395898 NDST1P52848 882 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 C16orf72Q14CZ0 275 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 FAM98BQ52LJ0 330 aaKnown RBP5.59□□□□□ -1.52
VPS13C-204ENST00000395898 ARMCX4Q5H9R4 360 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 DSG4Q86SJ6 1040 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 KCNMB4Q86W47 210 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 KIF2BQ8N4N8 673 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 DDHD1Q8NEL9 900 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 REPS2Q8NFH8 660 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 UGT2B28Q9BY64 529 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 AGXT2Q9BYV1 514 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 TCF7L2Q9NQB0 619 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 ABCC13Q9NSE7 274 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 DLGAP2Q9P1A6 1054 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 PRR23AA6NEV1 266 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC154A6NI56 674 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CBX4O00257 560 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 MICAL2O94851 1124 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 PCNAP12004 261 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CD44P16070 742 aaKnown RBP5.59□□□□□ -1.52
VPS13C-204ENST00000395898 SCTRP47872 440 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CD151P48509 253 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 NR6A1Q15406 480 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CDKAL1Q5VV42 579 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 KYAT3Q6YP21 454 aaKnown RBP5.59□□□□□ -1.52
VPS13C-204ENST00000395898 MCOLN2Q8IZK6 566 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 DPP10Q8N608 796 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 C10orf53Q8N6V4 93 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 EIF1ADQ8N9N8 165 aaKnown RBP5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC3Q9BQI4 270 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 DCLK3Q9C098 648 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 CIPCQ9C0C6 399 aa5.59□□□□□ -1.52
VPS13C-204ENST00000395898 SLC12A8A0AV02 714 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 UBDO15205 165 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MSCO60682 206 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MAP3K6O95382 1288 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GSTM1P09488 218 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SERPINB3P29508 390 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GP5P40197 560 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TRAF2Q12933 501 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms