RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GPR15P49685 360 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 MAXP61244 160 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 CCDC6Q16204 474 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 KLHL38Q2WGJ6 581 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 SPATA31D4Q6ZUB0 917 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 TRPC7Q9HCX4 862 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 BFARQ9NZS9 450 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 ATP11BQ9Y2G3 1177 aa16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.41■□□□□ 0.22
SMARCD1-202ENST00000394963 TRAPPC3O43617 180 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 ITGAVP06756 1048 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 CPA2P48052 419 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 MORN1Q5T089 497 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 OR52K1Q8NGK4 314 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 KBTBD7Q8WVZ9 684 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 CRTAC1Q9NQ79 661 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 PPP1R12AO14974 1030 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 TROVE2P10155 538 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 GMPRP36959 345 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 GLRBP48167 497 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 PGGT1BP53609 377 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 POLNQ7Z5Q5 900 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 NSMCE1Q8WV22 266 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 MECRQ9BV79 373 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 ROPN1BQ9BZX4 212 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 ROPN1Q9HAT0 212 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 NUDT17P0C025 328 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 TTC3P53804 2025 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 SKOR1P84550 965 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 TRMT10BQ6PF06 316 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 SPATA21Q7Z572 469 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 RASSF3Q86WH2 238 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 SHOC2Q9UQ13 582 aa16.4■□□□□ 0.22
SMARCD1-202ENST00000394963 TTC24A2A3L6 582 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ARHGAP42A6NI28 874 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 H0Y3Z8 333 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 TSPAN3O60637 253 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 PFKMP08237 780 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NOS2P35228 1153 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 RNASEH2BQ5TBB1 312 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 IGDCC3Q8IVU1 814 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 MPP5Q8N3R9 675 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ATP2A3Q93084 1043 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 PGM2Q96G03 612 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 RPRD1AQ96P16 312 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 SCN1AP35498 2009 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 TCRBV9S1A1TA0A576 114 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 FAM72CH0Y354 149 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 MGEA5O60502 916 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 TOP3BO95985 862 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NOGQ13253 232 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ANKRD20A2Q5SQ80 823 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 FAM72AQ5TYM5 149 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ANKRD20A1Q5TYW2 823 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 FAM72DQ6L9T8 149 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 FAM72BQ86X60 149 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 P2RY11Q96G91 374 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ABCF3Q9NUQ8 709 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC17A7Q9P2U7 560 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NME7Q9Y5B8 376 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 IVDP26440 423 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ACLYP53396 1101 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 UBXN11Q5T124 520 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NXNQ6DKJ4 435 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ATPAF2Q8N5M1 289 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 FBXO32Q969P5 355 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ERP27Q96DN0 273 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 ERLEC1Q96DZ1 483 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 NUP205Q92621 2012 aa16.39■□□□□ 0.21
SMARCD1-202ENST00000394963 PIRTP0C851 137 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 PCK1P35558 622 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 PDK1Q15118 436 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 NOMO1Q15155 1222 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 BZW1Q7L1Q6 419 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 PRPF39Q86UA1 669 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 PNPLA1Q8N8W4 532 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 KHSRPQ92945 711 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 CNTN6Q9UQ52 1028 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 ZFXP17010 805 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 PRPSAP1Q14558 356 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 HSP90AA5PQ58FG0 334 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-202ENST00000394963 SLC35B2Q8TB61 432 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms