RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 POP1Q99575 1024 aaKnown RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 SEMA6BQ9H3T3 888 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 TOR3AQ9H497 397 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 WDR70Q9NW82 654 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 CCDC59Q9P031 241 aaKnown RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 PADI4Q9UM07 663 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 PPME1Q9Y570 386 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 NR2E3Q9Y5X4 410 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 SLIT3O75094 1523 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 DLG5Q8TDM6 1919 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 KIF1AQ12756 1690 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 GAS2O43903 313 aaKnown RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PRKCQQ04759 706 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 GRM2Q14416 872 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DRAP1Q14919 205 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 HERC3Q15034 1050 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 LIN9Q5TKA1 542 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 SLC9A4Q6AI14 798 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CENPPQ6IPU0 288 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CGB2Q6NT52 195 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DCUN1D2Q6PH85 259 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 SLC30A10Q6XR72 485 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 KYAT3Q6YP21 454 aaKnown RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RALGPS2Q86X27 583 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF354CQ86Y25 554 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RHPN2Q8IUC4 686 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ARMC8Q8IUR7 673 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ZSCAN18Q8TBC5 510 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 HM13Q8TCT9 377 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DLG3Q92796 817 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CNDP1Q96KN2 507 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 FAM118BQ9BPY3 351 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 STN1Q9H668 368 aaKnown RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ATP13A3Q9H7F0 1226 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 SLC35C2Q9NQQ7 365 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 MAN1C1Q9NR34 630 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 LGALS13Q9UHV8 139 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DNM3Q9UQ16 869 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PCDHB2Q9Y5E7 798 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 TNS2Q63HR2 1409 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 BTNL10A8MVZ5 291 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 MAGEB2O15479 319 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CLPXO76031 633 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PRKD3O94806 890 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ITGALP20701 1170 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ME2P23368 584 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF132P52740 706 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PRKAA2P54646 552 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 MED1Q15648 1581 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RALGPS1Q5JS13 557 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 C6orf10Q5SRN2 563 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 HGSNATQ68CP4 663 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF746Q6NUN9 644 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 BTN2A1Q7KYR7 527 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 SAMD14Q8IZD0 417 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 LSMEM1Q8N8F7 131 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 SNX31Q8N9S9 440 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RDH13Q8NBN7 331 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 OR7A2PQ8NGA2 310 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 GJA10Q969M2 543 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PWWP2AQ96N64 755 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF224Q9NZL3 707 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PKD2L1Q9P0L9 805 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 KCNN3Q9UGI6 736 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CPSF3Q9UKF6 684 aaKnown RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 A0A1W2PPM1 405 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 A8MX80 341 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 AURKAO14965 403 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RGS20O76081 388 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DDAH1O94760 285 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 GCNT3O95395 438 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ALBP02768 609 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ATP5BP06576 529 aaKnown RBP7.83□□□□□ -1.16
VTI1A-201ENST00000393077 KRT19P08727 400 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RBL1P28749 1068 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ACADSBP45954 432 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 MFAP3P55082 362 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 ALX1Q15699 326 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 NTRK3Q16288 839 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 HMBOX1Q6NT76 420 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CYP20A1Q6UW02 462 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 KYQ8NBH2 561 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 AGR3Q8TD06 166 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PROX1Q92786 737 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PAFAH2Q99487 392 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 C7orf25Q9BPX7 421 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 DGCR6LQ9BY27 220 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 TRIM15Q9C019 465 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 THAP2Q9H0W7 228 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 RMND5AQ9H871 391 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 PRM3Q9NNZ6 103 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 CDC14AQ9UNH5 594 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 UBE4BO95155 1302 aa7.83□□□□□ -1.16
VTI1A-201ENST00000393077 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 TOR1BO14657 336 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 ZMPSTE24O75844 475 aa7.82□□□□□ -1.16
VTI1A-201ENST00000393077 GDF11O95390 407 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms