RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GJA9P57773 515 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MAP7Q14244 749 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 FNBP1LQ5T0N5 605 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MAP3K21Q5TCX8 1036 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 C1orf146Q5VVC0 180 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TAF2Q6P1X5 1199 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 BEST2Q8NFU1 509 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM40Q8WWA1 233 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MTBPQ96DY7 904 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 PANX3Q96QZ0 392 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TWNKQ96RR1 684 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZIC5Q96T25 663 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZWILCHQ9H900 591 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 KLHL11Q9NVR0 708 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MKS1Q9NXB0 559 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ATXN10Q9UBB4 475 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 HMGXB4Q9UGU5 601 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 PIN4Q9Y237 131 aaKnown RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 RECQL4O94761 1208 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 VDRP11473 427 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 RPL7AP62424 266 aaKnown RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 IRX4P78413 519 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ASPHQ12797 758 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 LSAMPQ13449 338 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 GRM2Q14416 872 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 TBC1D25Q3MII6 688 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 GNASQ5JWF2 1037 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 SH2D4BQ5SQS7 431 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 DCUN1D2Q6PH85 259 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ALKAL1Q6UXT8 129 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 LRRC52Q8N7C0 313 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 RSAD2Q8WXG1 361 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 JADE3Q92613 823 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 PRR11Q96HE9 360 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZMAT2Q96NC0 199 aaKnown RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 MTG1Q9BT17 334 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 FRMD8Q9BZ67 464 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 NXF3Q9H4D5 531 aaKnown RBP9.24□□□□□ -0.93
GPNMB-202ENST00000381990 SLC7A8Q9UHI5 535 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 ZNF180Q9UJW8 692 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 KIAA1257Q9ULG3 409 aa9.24□□□□□ -0.93
GPNMB-202ENST00000381990 SCN1AP35498 2009 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SCN10AQ9Y5Y9 1956 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 FAM237BA0A1B0GVD1 139 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 MYADML2A6NDP7 307 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 COPEO14579 308 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 KRT37O76014 449 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 HMGCRP04035 888 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ENO1P06733 434 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SERPINA6P08185 405 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 STIP1P31948 543 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 CLCN2P51788 898 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 MED21Q13503 144 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 DBN1Q16643 649 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PTPN20Q4JDL3 420 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ATP13A4Q4VNC1 1196 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ALYREFQ86V81 257 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 LCA5Q86VQ0 697 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PDSS2Q86YH6 399 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 OR6Y1Q8NGX8 325 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 FAM172AQ8WUF8 416 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TRIB2Q92519 343 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 MCEEQ96PE7 176 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TSPAN18Q96SJ8 248 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 WDR83Q9BRX9 315 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 UPF3AQ9H1J1 476 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 CXCL16Q9H2A7 254 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 STN1Q9H668 368 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PNPLA8Q9NP80 782 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ARMCX1Q9P291 453 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 HES2Q9Y543 173 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PDCD11Q14690 1871 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TCRBV9S1A1TA0A576 114 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 BANF1O75531 89 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 MICAL2O94851 1124 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 KRT7P08729 469 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PYGBP11216 843 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 AOC1P19801 751 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 NDST1P52848 882 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ORC1Q13415 861 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 CYP4A22Q5TCH4 519 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ANKRD22Q5VYY1 191 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SLC26A11Q86WA9 606 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SERAC1Q96JX3 654 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SRPK1Q96SB4 655 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 KLF6Q99612 283 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 THTPAQ9BU02 230 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 NT5C1AQ9BXI3 368 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms