RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CDK5RAP1Q96SZ6 601 aaKnown RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 TLR8Q9NR97 1041 aaKnown RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CASTOR2A6NHX0 329 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 MICAL2O94851 1124 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF682O95780 498 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 PGS1Q32NB8 556 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 ZSWIM2Q8NEG5 633 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 RSPH1Q8WYR4 309 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 DNPEPQ9ULA0 475 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 PCDHGC5Q9Y5F6 944 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CNTNAP2Q9UHC6 1331 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 A0A096LPK6 155 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 APOC4-APOC2K7ER74 178 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 SERPINI2O75830 405 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 APOC2P02655 101 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 PSMA3P25788 255 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 HALP42357 657 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 IFI35P80217 286 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 HERC6Q8IVU3 1022 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 B3GALNT2Q8NCR0 500 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 DCDC2CA8MYV0 355 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 TCF3P15923 654 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 DNAJB2P25686 324 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 RAB27AP51159 221 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 TBCELQ5QJ74 424 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 PARVBQ9HBI1 364 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 WDR27A2RRH5 827 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MAP3K13O43283 966 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 HMGCRP04035 888 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 AMPD1P23109 780 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 FASP25445 335 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 SLC12A3P55017 1021 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 ALDH6A1Q02252 535 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CYP4Z1Q86W10 505 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 OXNAD1Q96HP4 312 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CPNE1Q99829 537 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 IDI2Q9BXS1 227 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CEP41Q9BYV8 373 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MROH7Q68CQ1 1323 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CPSF4O95639 269 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MT-CO1P00395 513 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 TPH1P17752 444 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 VCLP18206 1134 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MGAT1P26572 445 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 PRKCIP41743 596 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CDK7P50613 346 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 CCNG1P51959 295 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 C11orf74Q86VG3 221 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 PHF21BQ96EK2 531 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 KRCC1Q9NPI7 259 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 EML1O00423 815 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MIPP30301 263 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 GRK3P35626 688 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 SOX6P35712 828 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 EIF2B5Q13144 721 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 PKN2Q16513 984 aaKnown RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 MIER2Q8N344 545 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 LRRC39Q96DD0 335 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 ACOX2Q99424 681 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 KCTD14Q9BQ13 255 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-202ENST00000380518 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
COL2A1-202ENST00000380518 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 RGL2O15211 777 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ATP5BP06576 529 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CYP3A4P08684 503 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 EPHB3P54753 998 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TBX4P57082 545 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 SLC6A3Q01959 620 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 PPATQ06203 517 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 PRMT9Q6P2P2 845 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ARRDC4Q8NCT1 418 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ETNPPLQ8TBG4 499 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CATSPER2Q96P56 530 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 COMMD8Q9NX08 183 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CROTQ9UKG9 612 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 PCDHB5Q9Y5E4 795 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 POU1F1P28069 291 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CCT8P50990 548 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TRAF2Q12933 501 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 KRR1Q13601 381 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CBWD6Q4V339 395 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CBWD3Q5JTY5 395 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CBWD5Q5RIA9 395 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms