RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TLR8Q9NR97 1041 aaKnown RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 RBM22Q9NW64 420 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 ASTN2O75129 1339 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 TM9SF1O15321 606 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 LYPLA2O95372 231 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 NUDT17P0C025 328 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 COPAP53621 1224 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DSG1Q02413 1049 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 AASDHQ4L235 1098 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 LLGL2Q6P1M3 1020 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DDHD1Q8NEL9 900 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 SENP8Q96LD8 212 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 CEP41Q9BYV8 373 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 CDT1Q9H211 546 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 CDYLQ9Y232 598 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 AP4S1Q9Y587 144 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 AGPSO00116 658 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 PRPF4O43172 522 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 SNX3O60493 162 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 ADRA1DP25100 572 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 CLK2P49760 499 aaKnown RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 EPHB3P54753 998 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 RASA2Q15283 850 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 ART4Q93070 314 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DCLRE1BQ9H816 532 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 UMODL1Q5DID0 1318 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DENND1BQ6P3S1 775 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
NPHP4-201ENST00000378156 ELOVL4Q9GZR5 314 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 DCDC2Q9UHG0 476 aa15.42■□□□□ 0.06
NPHP4-201ENST00000378156 M0R2N6 131 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 RHOCP08134 193 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 NUP107P57740 925 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 RUNX1T1Q06455 604 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 GPR142Q7Z601 462 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PGBD3Q8N328 593 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CENPTQ96BT3 561 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 NEUROG2Q9H2A3 272 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PIH1D1Q9NWS0 290 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 VPS28Q9UK41 221 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DNAJC16Q9Y2G8 782 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 SOAT2O75908 522 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DDX5P17844 614 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 RPL7AP62424 266 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CCDC85BQ15834 202 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 TTLL9Q3SXZ7 439 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 UNC93AQ86WB7 457 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CLEC4FQ8N1N0 589 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 RASGEF1CQ8N431 466 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 OR5B17Q8NGF7 314 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 MAML3Q96JK9 1138 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 UBXN6Q9BZV1 441 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 ILKAPQ9H0C8 392 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DDX3YO15523 660 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PIAS1O75925 651 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CBX6O95503 412 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DNAJB2P25686 324 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PTPN4P29074 926 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PTPN7P35236 360 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 MAP2K5Q13163 448 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 ZACNQ401N2 412 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 GJC2Q5T442 439 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 UNC45BQ8IWX7 931 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 LRRC57Q8N9N7 239 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 PGLYRP2Q96PD5 576 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 ACO2Q99798 780 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 NT5MQ9NPB1 228 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DRG1Q9Y295 367 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 SRP72O76094 671 aaKnown RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 DRD4P21917 467 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 AMPD1P23109 780 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 NUMBP49757 651 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 ADCK2Q7Z695 626 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 ZNF75CPQ92670 426 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-201ENST00000378156 CHST12Q9NRB3 414 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 RNF19AQ9NV58 838 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 UBP1Q9NZI7 540 aa15.41■□□□□ 0.06
NPHP4-201ENST00000378156 FSCN2O14926 492 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 PDE5AO76074 875 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 ENDOD1O94919 500 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 RAG1P15918 1043 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 MARC1Q5VT66 337 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 EXOC3L1Q86VI1 746 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 TMEM86AQ8N2M4 240 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 CARNMT1Q8N4J0 409 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 CKAP2Q8WWK9 683 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 ENTPD7Q9NQZ7 604 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 IARS2Q9NSE4 1012 aaKnown RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 CDV3Q9UKY7 258 aaKnown RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 HES2Q9Y543 173 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 HEATR9A2RTY3 570 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 EFCAB14O75071 495 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 NFICP08651 508 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms