RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 MRPL1Q9BYD6 325 aaKnown RBP11.11□□□□□ -0.63
HIF3A-205ENST00000377670 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 DYRK1BQ9Y463 629 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 C16orf96A6NNT2 1141 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 ANXA9O76027 345 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 RHOBTB1O94844 696 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 DNTTP04053 509 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 MSH3P20585 1137 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 MLH1P40692 756 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
HIF3A-205ENST00000377670 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 KCNA10Q16322 511 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 CARD9Q9H257 536 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
HIF3A-205ENST00000377670 APRTP07741 180 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 SERPINB1P30740 379 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 SKP1P63208 163 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 LRRC74AQ0VAA2 488 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 MTSS1LQ765P7 747 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 TRMT11Q7Z4G4 463 aaKnown RBP11.11□□□□□ -0.63
HIF3A-205ENST00000377670 ARHGEF19Q8IW93 802 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 RUBCNLQ9H714 662 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 CAAP1Q9H8G2 361 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 SEPT4O43236 478 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 TBC1D4O60343 1298 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 ADH1CP00326 375 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 TKTL1P51854 596 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 KRT72Q14CN4 511 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 LRRC8BQ6P9F7 803 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 EMC1Q8N766 993 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.11□□□□□ -0.63
HIF3A-205ENST00000377670 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
HIF3A-205ENST00000377670 ITGB5P18084 799 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 HTR1BP28222 390 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 PTK7Q13308 1070 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KAT5Q92993 513 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 DNAJC1Q96KC8 554 aaKnown RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ROPN1BQ9BZX4 212 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ROPN1Q9HAT0 212 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 XPO7Q9UIA9 1087 aaKnown RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 PMPCBO75439 489 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CYP11B1P15538 503 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KHDRBS2Q5VWX1 349 aaKnown RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 LRRC8DQ7L1W4 858 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 TPCN2Q8NHX9 752 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ATP13A1Q9HD20 1204 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 VPS51Q9UID3 782 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KLHL2O95198 593 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CSH1P0DML2 217 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CSH2P0DML3 217 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ACRP10323 421 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 GEMP55040 296 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CDH8P55286 799 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ITIH4Q14624 930 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 BRD8Q9H0E9 1235 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 NMRK1Q9NWW6 199 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 NCDNQ9UBB6 729 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 GJB6O95452 261 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ACAT1P24752 427 aaKnown RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 SOAT1P35610 550 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 GLUD2P49448 558 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 ITGA8P53708 1063 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 CYP24A1Q07973 514 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 XRCC4Q13426 336 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 PTK6Q13882 451 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 KPNB1Q14974 876 aaKnown RBP11.1□□□□□ -0.63
HIF3A-205ENST00000377670 TRIM16LQ309B1 348 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 FAXCQ5TGI0 409 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 SHDQ96IW2 340 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
HIF3A-205ENST00000377670 LOC100653049A0A140TA62 436 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 F8VZ95 297 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 M0R3G1 203 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 SOCS7O14512 581 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 KRT34O76011 436 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 SRP72O76094 671 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 SNUPNO95149 360 aaKnown RBP11.09□□□□□ -0.63
HIF3A-205ENST00000377670 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
HIF3A-205ENST00000377670 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms