RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 MIS12Q9H081 205 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 KLC2Q9H0B6 622 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 R3HDMLQ9H3Y0 253 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 HOXC10Q9NYD6 342 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 HMGXB4Q9UGU5 601 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 EMCNQ9ULC0 261 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 NR2E3Q9Y5X4 410 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 TRDMT1O14717 391 aaKnown RBP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 BIRC5O15392 142 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 KLHL2O95198 593 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 IDH3AP50213 366 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 GK3PQ14409 553 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 KRT81Q14533 505 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TARBP2Q15633 366 aaKnown RBP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TMEM132AQ24JP5 1023 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 PDPK2PQ6A1A2 396 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ARCQ7LC44 396 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 PLD5Q8N7P1 536 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 AGR3Q8TD06 166 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TRAPPC12Q8WVT3 735 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ITFG2Q969R8 447 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 SDCBP2Q9H190 292 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ZNF112Q9UJU3 913 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 SF3B1O75533 1304 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 C19orf81C9J6K1 198 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 H3BNX3 289 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 METTL18O95568 372 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 SMIM18P0DKX4 95 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 PMLP29590 882 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 MSX2P35548 267 aaPredicted RBP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ACTRT2Q8TDY3 377 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 C12orf42Q96LP6 360 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TWNKQ96RR1 684 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 ADPGKQ9BRR6 497 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
COL9A2-202ENST00000372748 UBAP1Q9NZ09 502 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 APPL1Q9UKG1 709 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 B4GALT5O43286 388 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 PRKCBP05771 671 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 L1CAMP32004 1257 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TREML2Q5T2D2 321 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TRNP1Q6NT89 227 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 CASC4Q6P4E1 433 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 C10orf107Q8IVU9 208 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 TMEM192Q8IY95 271 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 GSDMBQ8TAX9 411 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 UBA3Q8TBC4 463 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 GRIP2Q9C0E4 1043 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 SORCS3Q9UPU3 1222 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 DTNAQ9Y4J8 743 aa15.26■□□□□ 0.03
COL9A2-202ENST00000372748 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 SMIM31A0A1B0GVY4 71 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 E9PBE3 544 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 VILLO15195 856 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 KLHL41O60662 606 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 MAFO75444 373 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 CSDE1O75534 798 aaKnown RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 TFAP2AP05549 437 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ITGA2BP08514 1039 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ICAM3P32942 547 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ATXN3P54252 364 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 BCAR1P56945 870 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 CDK18Q07002 472 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 CYP4V2Q6ZWL3 525 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 SDCCAG8Q86SQ7 713 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 RAB3IL1Q8TBN0 382 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 DGCR14Q96DF8 476 aaKnown RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 SIGLEC10Q96LC7 697 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 NLRP4Q96MN2 994 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 RNF157Q96PX1 679 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 RHBDL2Q9NX52 303 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 MKS1Q9NXB0 559 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 HSFX1Q9UBD0 423 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ITGA11Q9UKX5 1188 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 LCTP09848 1927 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 TPP1O14773 563 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 CLPTM1O96005 669 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ALDOAP04075 364 aaKnown RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 FDFT1P37268 417 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 TFDP2Q14188 446 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 MYBPC3Q14896 1274 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 FBXW8Q8N3Y1 598 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 METTL25Q8N6Q8 603 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 JADE3Q92613 823 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 KLRG1Q96E93 195 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 PRICKLE1Q96MT3 831 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 SORT1Q99523 831 aa15.25■□□□□ 0.03
COL9A2-202ENST00000372748 EBNA1BP2Q99848 306 aaKnown RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 OXCT2Q9BYC2 517 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-202ENST00000372748 XYLT2Q9H1B5 865 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms