RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 SHOX2O60902 331 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 NCF1P14598 390 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 PGAM1P18669 254 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 CD151P48509 253 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 CPT1AP50416 773 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 LRRC74AQ0VAA2 488 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 LRRC8BQ6P9F7 803 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ATP6V0D2Q8N8Y2 350 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ZNF384Q8TF68 577 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 RNF157Q96PX1 679 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 NT5MQ9NPB1 228 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 UTP6Q9NYH9 597 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 APPL1Q9UKG1 709 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 DEAF1O75398 565 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 APOA1P02647 267 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 TNFSF9P41273 254 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 NAGLUP54802 743 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 GTF2H3Q13889 308 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 GRTP1Q5TC63 336 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 HASPINQ8TF76 798 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 PYDC1Q8WXC3 89 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 NMRAL1Q9HBL8 299 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 RNF112Q9ULX5 631 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 FAM32AQ9Y421 112 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ERI2A8K979 691 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 TULP2O00295 520 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 NR5A2O00482 541 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 PSMG1O95456 288 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 LHX1P48742 406 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 POLNQ7Z5Q5 900 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 DIS3LQ8TF46 1054 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 CHADO15335 359 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 ATP6V1E1P36543 226 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 PTDSS1P48651 473 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 CLK1P49759 484 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 PLK1P53350 603 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 NCALDP61601 193 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 SLC27A1Q6PCB7 646 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 P3H2Q8IVL5 708 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 RBBP8Q99708 897 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 MMADHCQ9H3L0 296 aaPredicted RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 GPRC5DQ9NZD1 345 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 C2orf81A6NN90 581 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 PHGDHO43175 533 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 TBC1D12O60347 775 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 EDF1O60869 148 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 UPP2O95045 317 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
RD3-201ENST00000367002 ME2P23368 584 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 CCR1P32246 355 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 THPOP40225 353 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 CDK7P50613 346 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 CHRNB3Q05901 458 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 CAPSQ13938 189 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 NFYCQ13952 458 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 GRIK4Q16099 956 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 GALNTL6Q49A17 601 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 ZNF470Q6ECI4 717 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 OTOAQ7RTW8 1153 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 ELMOD1Q8N336 334 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 MFSD14AQ96MC6 490 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 BRD8Q9H0E9 1235 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 LRRC4CQ9HCJ2 640 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 FBXO6Q9NRD1 293 aaPredicted RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 MPOP05164 745 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 NFICP08651 508 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 IRF1P10914 325 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 RAG1P15918 1043 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 PTPRAP18433 802 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 MMP8P22894 467 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 TRPC1P48995 793 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 SLC25A3Q00325 362 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 MARC1Q5VT66 337 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 ZNF398Q8TD17 642 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 SNRNP25Q9BV90 132 aaKnown RBP11.75□□□□□ -0.53
RD3-201ENST00000367002 NID2Q14112 1375 aa11.75□□□□□ -0.53
RD3-201ENST00000367002 TMEM191CA6NGB0 347 aa11.74□□□□□ -0.53
RD3-201ENST00000367002 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms