RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MAF1Q9H063 256 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 WARS2Q9UGM6 360 aaKnown RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 UMODL1Q5DID0 1318 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 XPO1O14980 1071 aaKnown RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PAEPP09466 180 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ITGB5P18084 799 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 KDELR1P24390 212 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PTGER2P43116 358 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 RPL7AP62424 266 aaKnown RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 KBTBD12Q3ZCT8 623 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 DCAF12L1Q5VU92 463 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 TATDN1Q6P1N9 297 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 LAYNQ6UX15 382 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 UROC1Q96N76 676 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 UBE2OQ9C0C9 1292 aaKnown RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 CCDC134Q9H6E4 229 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 FKBP6O75344 327 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 RASSF9O75901 435 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 MICAL2O94851 1124 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 GLRA2P23416 452 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 MIPP30301 263 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 SLC1A6P48664 564 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 PEX5P50542 639 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 CDH8P55286 799 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 FBXO47Q5MNV8 452 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 GRAMD4Q6IC98 578 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 IRGCQ6NXR0 463 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 TBC1D19Q8N5T2 526 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 TRIM54Q9BYV2 358 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 RWDD3Q9Y3V2 267 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 F5H5T6 163 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 KRT36O76013 467 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 IL10P22301 178 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 CYP2F1P24903 491 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 DEFB107AQ8IZN7 70 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 SGF29Q96ES7 293 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 ILKAPQ9H0C8 392 aaPredicted RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 IL1RAPL1Q9NZN1 696 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 GPR25O00155 361 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 AP3B1O00203 1094 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 PSMD3O43242 534 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 SRP72O76094 671 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 TGM2P21980 687 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 NDUFV1P49821 464 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 NOMO3P69849 1222 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 ZDHHC24Q6UX98 284 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 OTOAQ7RTW8 1153 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 ECHDC2Q86YB7 292 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 FITM2Q8N6M3 262 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 STN1Q9H668 368 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 DRG1Q9Y295 367 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 KDM1AO60341 852 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 RPL22P35268 128 aaKnown RBP12.66□□□□□ -0.38
COLCA1-201ENST00000355430 BNIP1Q12981 228 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 MAGEC3Q8TD91 643 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 CCT7Q99832 543 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
COLCA1-201ENST00000355430 WDR27A2RRH5 827 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 SNX2O60749 519 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 ACO1P21399 889 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 SERPINB8P50452 374 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 DENND1BQ6P3S1 775 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 APBB2Q92870 758 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 NCLNQ969V3 563 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 SKA1Q96BD8 255 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 ZDHHC18Q9NUE0 388 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 TMEM59LQ9UK28 342 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 AP4E1Q9UPM8 1137 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 RGPD5Q99666 1765 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 PDE5AO76074 875 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 FBXO21O94952 628 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 CREB1P16220 341 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 ZNF212Q9UDV6 495 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 APOC4-APOC2K7ER74 178 aa12.65□□□□□ -0.38
COLCA1-201ENST00000355430 EDF1O60869 148 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
COLCA1-201ENST00000355430 APOC2P02655 101 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms