RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 IFI35P80217 286 aaPredicted RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 MSS51Q4VC12 460 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 FAM171A1Q5VUB5 890 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 C4orf50Q6ZRC1 276 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 DEFB128Q7Z7B8 93 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 HOOK3Q86VS8 718 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 PSTKQ8IV42 348 aaKnown RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 IRGQQ8WZA9 623 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 FBXW11Q9UKB1 542 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 LRFN2Q9ULH4 789 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 SCN5AQ14524 2016 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 RASGRF2O14827 1237 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 DNAJC8O75937 253 aaPredicted RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 GPR15P49685 360 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 TLE2Q04725 743 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 SNCBQ16143 134 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 KCNT2Q6UVM3 1135 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 ANKRD33Q7Z3H0 272 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 TMEM173Q86WV6 379 aaPredicted RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 SCN4BQ8IWT1 228 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 PGAP3Q96FM1 320 aaPredicted RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 CHMP6Q96FZ7 201 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 PGM2Q96G03 612 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 CD248Q9HCU0 757 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 PNPLA8Q9NP80 782 aa17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.73■□□□□ 0.43
ATAD3A-201ENST00000339113 ALDH2P05091 517 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 SCTRP47872 440 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 AUHQ13825 339 aaKnown RBP17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 CPLX4Q7Z7G2 160 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 PCGF5Q86SE9 256 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 RTP4Q96DX8 246 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 PGLYRP2Q96PD5 576 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 SLC9A7Q96T83 725 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 SNX10Q9Y5X0 201 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 ZFXP17010 805 aaPredicted RBP17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 PDIA2Q13087 525 aaKnown RBP17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 DDR2Q16832 855 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 EFHC2Q5JST6 749 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 C6orf118Q5T5N4 469 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 CROCCP2Q86T23 111 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 TAC4Q86UU9 113 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 TP53INP2Q8IXH6 220 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 SCML4Q8N228 414 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 TTC9BQ8N6N2 239 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 APBB2Q92870 758 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 MCM8Q9UJA3 840 aa17.72■□□□□ 0.43
ATAD3A-201ENST00000339113 PTPRDP23468 1912 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 TBKBP1A7MCY6 615 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 ALOX15BO15296 676 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 MFSD11O43934 449 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 CXCL10P02778 98 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 NR2C2P49116 596 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 TTC3P53804 2025 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 MRPL58Q14197 206 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 FAXCQ5TGI0 409 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 ZBED8Q8IZ13 594 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 CCDC110Q8TBZ0 833 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 DQX1Q8TE96 717 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 NTAN1Q96AB6 310 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 WDR83Q9BRX9 315 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 RCOR3Q9P2K3 495 aaPredicted RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 XPO7Q9UIA9 1087 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 SYN3O14994 580 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 RGS16O15492 202 aaPredicted RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 DGKIO75912 1065 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 CXCR3P49682 368 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 SEMA3BQ13214 749 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 DPYSQ14117 519 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 CTXN3Q4LDR2 81 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 SLC45A4Q5BKX6 768 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 RSPO2Q6UXX9 243 aaPredicted RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 TAS1R1Q7RTX1 841 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 ANKMY2Q8IV38 441 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 DCP1BQ8IZD4 617 aaKnown RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 ATAD1Q8NBU5 361 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 OLFM3Q96PB7 478 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 ZNF317Q96PQ6 595 aaPredicted RBP17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 RAB6BQ9NRW1 208 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 CTNNAL1Q9UBT7 734 aa17.71■□□□□ 0.43
ATAD3A-201ENST00000339113 FOXO6A8MYZ6 492 aa17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 H3BRJ5 948 aa17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 EEF2KO00418 725 aaKnown RBP17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 MGRN1O60291 552 aa17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 GALTP07902 379 aa17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 SCAPQ12770 1279 aa17.7■□□□□ 0.42
ATAD3A-201ENST00000339113 HIF1AQ16665 826 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms