RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 NPTXRO95502 500 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 EFNA5P52803 228 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 PTSQ03393 145 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 IL18R1Q13478 541 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 FBXW8Q8N3Y1 598 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 POMKQ9H5K3 350 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 LRRC40Q9H9A6 602 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 DOLKQ9UPQ8 538 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 DNMT1P26358 1616 aaKnown RBP16.84■□□□□ 0.29
SMAD3-201ENST00000327367 FAM25EA8MYX2 175 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 CLTBP09497 229 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 CTSHP09668 335 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 PSMA3P25788 255 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 PTENP60484 403 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 PRKCQQ04759 706 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 CUL2Q13617 745 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 TTC27Q6P3X3 843 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 SEMA6BQ9H3T3 888 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 WDR41Q9HAD4 459 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 GDF3Q9NR23 364 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 RAB21Q9UL25 225 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 ANXA9O76027 345 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 RRM1P23921 792 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 IDH2P48735 452 aaKnown RBP16.84■□□□□ 0.29
SMAD3-201ENST00000327367 NPY2RP49146 381 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 ARL4DP49703 201 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 EIF2B5Q13144 721 aaKnown RBP16.84■□□□□ 0.29
SMAD3-201ENST00000327367 NDUFAF6Q330K2 333 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 AMIGO2Q86SJ2 522 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 SETD9Q8NE22 299 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 UPP2O95045 317 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 CBX3Q13185 183 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 ALX1Q15699 326 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 TSGA10IPQ3SY00 556 aa16.84■□□□□ 0.29
SMAD3-201ENST00000327367 SLCO1B7G3V0H7 640 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 WARSP23381 471 aaKnown RBP16.83■□□□□ 0.29
SMAD3-201ENST00000327367 ABCG1P45844 678 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 RBBP4Q09028 425 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 CWF19L1Q69YN2 538 aaKnown RBP16.83■□□□□ 0.29
SMAD3-201ENST00000327367 POLNQ7Z5Q5 900 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 NET1Q7Z628 596 aaPredicted RBP16.83■□□□□ 0.29
SMAD3-201ENST00000327367 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 WDCPQ9H6R7 721 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 EXTL3O43909 919 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 OR6B1O95007 311 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 CYP11B1P15538 503 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 POU6F1Q14863 301 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 LPCAT4Q643R3 524 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 C4orf22Q6V702 233 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 NUDT5Q9UKK9 219 aa16.83■□□□□ 0.29
SMAD3-201ENST00000327367 NPEPPSP55786 919 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 SPP2Q13103 211 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 DENND5AQ6IQ26 1287 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 MRNIPQ6NTE8 343 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 PRMT9Q6P2P2 845 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 SLC9A7Q96T83 725 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 DCLK3Q9C098 648 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 CMTM6Q9NX76 183 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 TMCC2O75069 709 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 CYBBP04839 570 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 CCNA2P20248 432 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 MAPK1P28482 360 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 GEMP55040 296 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 KHDRBS3O75525 346 aaKnown RBP16.83■□□□□ 0.28
SMAD3-201ENST00000327367 ATP6V1C1P21283 382 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 GPR162Q16538 588 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 BROXQ5VW32 411 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 NEK5Q6P3R8 708 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 ZNF677Q86XU0 584 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 FAM172AQ8WUF8 416 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 PHACTR1Q9C0D0 580 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.83■□□□□ 0.287e-6■□□□□ 8.6
SMAD3-201ENST00000327367 ING4Q9UNL4 249 aa16.83■□□□□ 0.28
SMAD3-201ENST00000327367 SEPHS1P49903 392 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 OLFML2AQ68BL7 652 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 LYVE1Q9Y5Y7 322 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 MGAT1P26572 445 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 MGAT5BQ3V5L5 792 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 C10orf120Q5SQS8 335 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 MYO1HQ8N1T3 1032 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 ZNF540Q8NDQ6 660 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 MED8Q96G25 268 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 COA1Q9GZY4 146 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 SAR1AQ9NR31 198 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 AGPAT3Q9NRZ7 376 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 DDIT4Q9NX09 232 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 GALNT8Q9NY28 637 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
SMAD3-201ENST00000327367 C2orf81A6NN90 581 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 SLC37A4O43826 429 aa16.82■□□□□ 0.28
SMAD3-201ENST00000327367 SKIV2L2P42285 1042 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms