RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
NBPF3-201ENST00000318220 A0A1B0GUA9 196 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 STBD1O95210 358 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 KITP10721 976 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TGM2P21980 687 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ARL2P36404 184 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 HALP42357 657 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 PFKPQ01813 784 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 STAT4Q14765 748 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ANO7Q6IWH7 933 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZNF366Q8N895 744 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 SLC22A17Q8WUG5 538 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZBTB18Q99592 522 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 BRD8Q9H0E9 1235 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 SEPT3Q9UH03 358 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 L1RE1Q9UN81 338 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 NCF1BA6NI72 391 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 NCF1CA8MVU1 366 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 PSMD3O43242 534 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 LSM8O95777 96 aaKnown RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 C1RP00736 705 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 NCF1P14598 390 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MSH3P20585 1137 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TIE1P35590 1138 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MAXP61244 160 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 CLEC16AQ2KHT3 1053 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MRNIPQ6NTE8 343 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZNF571Q7Z3V5 609 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 GSPT2Q8IYD1 628 aaKnown RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 HJURPQ8NCD3 748 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MAML1Q92585 1016 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 CASP10Q92851 521 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 GKN1Q9NS71 199 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TTC28Q96AY4 2481 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 PRKCQQ04759 706 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZNF268Q14587 947 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 LPAL2Q16609 132 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TAPT1Q6NXT6 567 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TSTD1Q8NFU3 115 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 KLK6Q92876 244 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 RBM15Q96T37 977 aaKnown RBP eCLIP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 SMIM24O75264 130 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MIPP30301 263 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 FAM46CQ5VWP2 391 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 TOP6BLQ8N6T0 577 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 PCED1BQ96HM7 432 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 KLF6Q99612 283 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-201ENST00000318220 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ARHGAP28Q9P2N2 729 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZNHIT2Q9UHR6 403 aa13.61□□□□□ -0.23
NBPF3-201ENST00000318220 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
NBPF3-201ENST00000318220 CYBAP13498 195 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 RFC1P35251 1148 aaPredicted RBP13.6□□□□□ -0.23
NBPF3-201ENST00000318220 IRF5Q13568 498 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 FCRL2Q96LA5 508 aaPredicted RBP13.6□□□□□ -0.23
NBPF3-201ENST00000318220 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
NBPF3-201ENST00000318220 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 RFXAPO00287 272 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 SYN3O14994 580 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 TTI1O43156 1089 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 GPR1P46091 355 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 EPHB4P54760 987 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 INTS6LQ5JSJ4 861 aaKnown RBP13.6□□□□□ -0.23
NBPF3-201ENST00000318220 SH3RF2Q8TEC5 729 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 KRT35Q92764 455 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 TMEM159Q96B96 161 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 LAMB3Q13751 1172 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 UGP2Q16851 508 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
NBPF3-201ENST00000318220 SUPT3HB4E1H0 165 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 SUPT3HO75486 399 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 UGT2B4P06133 528 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 LMO2P25791 158 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 LINGO4Q6UY18 593 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 MCOLN2Q8IZK6 566 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 TMCO5AQ8N6Q1 288 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 DUSP9Q99956 384 aaKnown RBP13.59□□□□□ -0.23
NBPF3-201ENST00000318220 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 SPASTQ9UBP0 616 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 AAR2Q9Y312 384 aaKnown RBP13.59□□□□□ -0.23
NBPF3-201ENST00000318220 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
NBPF3-201ENST00000318220 ASTN1O14525 1302 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms