RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GRIN3AQ8TCU5 1115 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 SEMA4DQ92854 862 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 SUSD3Q96L08 255 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 FICDQ9BVA6 458 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 FAM124BQ9H5Z6 455 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 NDRG2Q9UN36 371 aaKnown RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MYBPHLA2RUH7 354 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 LRRC10BA6NIK2 292 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 ACOX1Q15067 660 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 GRAMD4Q6IC98 578 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 C11orf63Q6NUN7 778 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 PPIL6Q8IXY8 311 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 ELMO2Q96JJ3 720 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 TRIM51Q9BSJ1 452 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 DUS2Q9NX74 493 aaKnown RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 GJD2Q9UKL4 321 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CHMP2BQ9UQN3 213 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 PER2O15055 1255 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 DAB1O75553 588 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 IL1BP01584 269 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 PIGRP01833 764 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 SERPIND1P05546 499 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 BMP6P22004 513 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 FSHRP23945 695 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 RFC1P35251 1148 aaPredicted RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 TPD52P55327 224 aaPredicted RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 FAM46CQ5VWP2 391 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 CDCA2Q69YH5 1023 aaPredicted RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 TMEM192Q8IY95 271 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 RRAGDQ9NQL2 400 aaPredicted RBP9.52□□□□□ -0.88
PTPRE-202ENST00000306042 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.88
PTPRE-202ENST00000306042 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MTM1Q13496 603 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 USP10Q14694 798 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MPPE1Q53F39 396 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ATG16L1Q676U5 607 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 CNPY4Q8N129 248 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ACTL9Q8TC94 416 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PKNOX2Q96KN3 472 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 APOL2Q9BQE5 337 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 YIPF2Q9BWQ6 316 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PLK2Q9NYY3 685 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 UBP1Q9NZI7 540 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 CLCA2Q9UQC9 943 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 HEATR9A2RTY3 570 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 DDHD2O94830 711 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 OAS2P29728 719 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 CORO1AP31146 461 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 COILP38432 576 aaPredicted RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MMP13P45452 471 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 GATMP50440 423 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MAPK7Q13164 816 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 BRMS1LQ5PSV4 323 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ARMC12Q5T9G4 340 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PDE12Q6L8Q7 609 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PHACTR4Q8IZ21 702 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ARL14EPQ8N8R7 260 aaPredicted RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 STAMBPL1Q96FJ0 436 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 PDLIM2Q96JY6 352 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 HNRNPABQ99729 332 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 NKX2-4Q9H2Z4 354 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ZSCAN5CA6NGD5 496 aaPredicted RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 SLC38A8A6NNN8 435 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 GGCXP38435 758 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MAPK8P45983 427 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 NR2C2P49116 596 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 UBXN2BQ14CS0 331 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ARHGAP24Q8N264 748 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 KLHL23Q8NBE8 558 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 ATG4AQ8WYN0 398 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 FUCA2Q9BTY2 467 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 POLR1EQ9GZS1 481 aaKnown RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 MAN1C1Q9NR34 630 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 KIAA1522Q9P206 1035 aaPredicted RBP9.52□□□□□ -0.89
PTPRE-202ENST00000306042 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 NAV1Q8NEY1 1877 aa9.52□□□□□ -0.89
PTPRE-202ENST00000306042 RBM47A0AV96 593 aaKnown RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 O00370 1275 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 RHOBTB1O94844 696 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SOD2P04179 222 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PRKCIP41743 596 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FNTAP49354 379 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 NOMO3P69849 1222 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ALS2CLQ60I27 953 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms