RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 CALCOCO2Q13137 446 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SLC29A2Q14542 456 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 STXBP5Q5T5C0 1151 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 TPGS2Q68CL5 300 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SLFN12LQ6IEE8 588 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 RHBDF2Q6PJF5 856 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 VITQ6UXI7 678 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 TAX1BP1Q86VP1 789 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SUMF1Q8NBK3 374 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 GRK7Q8WTQ7 553 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SNRNP27Q8WVK2 155 aaKnown RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 FAM3CQ92520 227 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 VCPIP1Q96JH7 1222 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 BTBD6Q96KE9 485 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ASB16Q96NS5 453 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 XPO6Q96QU8 1125 aaKnown RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 TMEM209Q96SK2 561 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 NELL2Q99435 816 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 FAM213AQ9BRX8 229 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ACTR5Q9H9F9 607 aaPredicted RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 RPF1Q9H9Y2 349 aaKnown RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ZNF334Q9HCZ1 680 aaPredicted RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 HOMER3Q9NSC5 361 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 CHORDC1Q9UHD1 332 aaPredicted RBP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 ANAPC7Q9UJX3 599 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 CNTN6Q9UQ52 1028 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 PIAS3Q9Y6X2 628 aa8.17□□□□□ -1.1
TM4SF1-201ENST00000305366 MED19A0JLT2 244 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 HEPACAM2A8MVW5 462 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 RGS16O15492 202 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 PSTPIP1O43586 416 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 MOSPD3O75425 235 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 STK10O94804 968 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 LDHAP00338 332 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 POU2F2P09086 479 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 DLATP10515 647 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 KRT5P13647 590 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 PSMC3P17980 439 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 DRD4P21917 467 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 ALDH1A3P47895 512 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 ACOT2P49753 483 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 EPHB3P54753 998 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 FZD5Q13467 585 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 PTK6Q13882 451 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 JADE1Q6IE81 842 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 ZPBP2Q6X784 338 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 MON1BQ7L1V2 547 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 RTL10Q7L3V2 364 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 C11orf96Q7Z7L8 435 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 CPNE8Q86YQ8 564 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 TTC9BQ8N6N2 239 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 TTC16Q8NEE8 873 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 SHKBP1Q8TBC3 707 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 IRF7Q92985 503 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 CHMP6Q96FZ7 201 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 SEC16BQ96JE7 1060 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 ZFYVE19Q96K21 471 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 ZNF317Q96PQ6 595 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 FNBP1Q96RU3 617 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 MSTO1Q9BUK6 570 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 CRISPLD1Q9H336 500 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 LRRC4CQ9HCJ2 640 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 FBXO9Q9UK97 447 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 FBXO4Q9UKT5 387 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 YIPF1Q9Y548 306 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 VPS13AQ96RL7 3174 aa8.16□□□□□ -1.1
TM4SF1-201ENST00000305366 WDR81Q562E7 1941 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 EP300Q09472 2414 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SHISA7A6NL88 538 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SLC38A8A6NNN8 435 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 MAN2B1O00754 1011 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 DPYSL4O14531 572 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 RASGRF2O14827 1237 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 TP73O15350 636 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PROSCO94903 275 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 VNN2O95498 520 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 GAS8O95995 478 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 ACO1P21399 889 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 IVDP26440 423 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 ACTN3Q08043 901 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PPP1R7Q15435 360 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 TAF12Q16514 161 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 QPCTQ16769 361 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 LACTB2Q53H82 288 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 GKAP1Q5VSY0 366 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 TDRD10Q5VZ19 366 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 HEATR6Q6AI08 1181 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 OVOS1Q6IE37 1185 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 MMS22LQ6ZRQ5 1243 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PRR23BQ6ZRT6 265 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 ERMP1Q7Z2K6 904 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms