RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MTFR1Q15390 333 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 TFDP3Q5H9I0 405 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ADCK1Q86TW2 530 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 GTPBP2Q9BX10 602 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 E5RJQ4 531 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 KIAA0391O15091 583 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 KPNA6O60684 536 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PIAS1O75925 651 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ZSCAN5DPP0CG00 497 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 SLC29A2Q14542 456 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 MYLPFQ96A32 169 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 SKA1Q96BD8 255 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 IKZF4Q9H2S9 585 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF229Q9UJW7 825 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 DSEQ9UL01 958 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 AAR2Q9Y312 384 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 LRRIQ3A6PVS8 624 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 WDR47O94967 919 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 MRPS6P82932 125 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 ITGA7Q13683 1181 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 FAM83EQ2M2I3 478 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CLYBLQ8N0X4 340 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CALML6Q8TD86 181 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 TMEM159Q96B96 161 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ACSS2Q9NR19 701 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PSMC3IPQ9P2W1 217 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 UVRAGQ9P2Y5 699 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 TNFSF13BQ9Y275 285 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 HNRNPH2P55795 449 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 PPP4CP60510 307 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 HSPA14Q0VDF9 509 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PPIL6Q8IXY8 311 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 DNERQ8NFT8 737 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 BBS4Q96RK4 519 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ACTR8Q9H981 624 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF521Q96K83 1311 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 TMEM191CA6NGB0 347 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
SCN9A-201ENST00000303354 CRTAMO95727 393 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PSMD8P48556 350 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 NFYCQ13952 458 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PTPAQ15257 358 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PTPN20Q4JDL3 420 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ARHGAP17Q68EM7 881 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 GRAMD4Q6IC98 578 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CENPPQ6IPU0 288 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 R3HCC1LQ7Z5L2 792 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 TNS2Q63HR2 1409 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 RNF103O00237 685 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DDX3YO15523 660 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 IGSF6O95976 241 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SLC2A3P11169 496 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ABCE1P61221 599 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 NOGQ13253 232 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SV2AQ7L0J3 742 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TRIM69Q86WT6 500 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TBCDQ9BTW9 1192 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 KIAA1683Q9H0B3 1180 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 INTS13Q9NVM9 706 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SNX12Q9UMY4 172 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 POLR1DQ9Y2S0 133 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TBC1D4O60343 1298 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 KLHL41O60662 606 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 VIL1P09327 827 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PPIL2Q13356 520 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 IQSEC1Q6DN90 963 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 FAAH2Q6GMR7 532 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 WDR49Q8IV35 697 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 GLIS3Q8NEA6 775 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 E2F7Q96AV8 911 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SMARCD1Q96GM5 515 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 UBTFL6P0CB48 400 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PRKCZQ05513 592 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TBX2Q13207 712 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 STAT4Q14765 748 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DDI2Q5TDH0 399 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 EFCAB3Q8N7B9 438 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CXorf40BQ96DE9 158 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF333Q96JL9 665 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CYP2S1Q96SQ9 504 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 NDNQ99608 321 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PRPF18Q99633 342 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 OSBPL1AQ9BXW6 950 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CTNNAL1Q9UBT7 734 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 BAIAP3O94812 1187 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SNRPAP09012 282 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 OR1D2P34982 312 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 MAPK10P53779 464 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 AGAP9Q5VTM2 703 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF720Q7Z2F6 126 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SPATA21Q7Z572 469 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DSG4Q86SJ6 1040 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ILDR1Q86SU0 546 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SLC41A1Q8IVJ1 513 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TCF25Q9BQ70 676 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 MANSC1Q9H8J5 431 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms