RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RIPK1Q13546 671 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 CAPRIN1Q14444 709 aaKnown RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 CNGA2Q16280 664 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF571Q7Z3V5 609 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SAR1AQ9NR31 198 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 FAM49BQ9NUQ9 324 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 PGAP2Q9UHJ9 254 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ALBP02768 609 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SHBGP04278 402 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SULT1E1P49888 294 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 CYP24A1Q07973 514 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 GRIK3Q13003 919 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 NT5DC1Q5TFE4 455 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 MAP4K3Q8IVH8 894 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 TMEM86AQ8N2M4 240 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ETNPPLQ8TBG4 499 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 PAWRQ96IZ0 340 aaKnown RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 GAD1Q99259 594 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ADGRA3Q8IWK6 1321 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 GLRA2P23416 452 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 RPL21P46778 160 aaKnown RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 MTFR1Q15390 333 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 MEA1Q16626 185 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 TTC39BQ5VTQ0 682 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 DEFB107AQ8IZN7 70 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 CDC26Q8NHZ8 85 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SKA2Q8WVK7 121 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 FBXO32Q969P5 355 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 TBC1D4O60343 1298 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 RECQL4O94761 1208 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC4A1P02730 911 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 TNFRSF8P28908 595 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 KBTBD12Q3ZCT8 623 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 PGBD3Q8N328 593 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 KIF17Q9P2E2 1029 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 KCNN4O15554 427 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 ATP6V1G1O75348 118 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SPAG6O75602 509 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SMNDC1O75940 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 USP41Q3LFD5 358 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CBWD2Q8IUF1 395 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 DDIASQ8IXT1 998 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 RFWD2Q8NHY2 731 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 TTC8Q8TAM2 541 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 ASAP3Q8TDY4 903 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CKAP2Q8WWK9 683 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 LENG1Q96BZ8 264 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 TMEM79Q9BSE2 394 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 OSBPL7Q9BZF2 842 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SP110Q9HB58 689 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SYBUQ9NX95 663 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 GABRQQ9UN88 632 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 KPNA4O00629 521 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SRP72O76094 671 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 VDRP11473 427 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CUL2Q13617 745 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 DDX53Q86TM3 631 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 EIF1ADQ8N9N8 165 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 ABLIM1O14639 778 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 BCL10O95999 233 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 BMP6P22004 513 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 RPL9P32969 192 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 EARS2Q5JPH6 523 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 BNC2Q6ZN30 1099 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 OTOP2Q7RTS6 562 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 HORMAD1Q86X24 394 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 HAS1Q92839 578 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SOX13Q9UN79 622 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 A8MUI8 341 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 CKMP06732 381 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 DARSP14868 501 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 HLA-DPA1P20036 260 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 PMLP29590 882 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SCNN1GP51170 649 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 GJA9P57773 515 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 IRF5Q13568 498 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 GPAT2Q6NUI2 795 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms