RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 MRPS35P82673 323 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 PRKCQQ04759 706 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 KCTD19Q17RG1 926 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 EML3Q32P44 896 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 NECAB2Q7Z6G3 386 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 E9PCH4 1651 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 LTFP02788 710 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ZSCAN5DPP0CG00 497 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PSMC3P17980 439 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 ITIH4Q14624 930 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 TCHHL1Q5QJ38 904 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 ZNF470Q6ECI4 717 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 HTR3CQ8WXA8 447 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 EMILIN2Q9BXX0 1053 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 SENP6Q9GZR1 1112 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 TAGLN3Q9UI15 199 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 SYNCRIPO60506 623 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 BDNFP23560 247 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 VAC14Q08AM6 782 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ATG16L2Q8NAA4 619 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 DPF3Q92784 378 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 MTERF3Q96E29 417 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 SH3GL3Q99963 347 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 F8VP50 259 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 HOXA2O43364 376 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 CALB2P22676 271 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 CD151P48509 253 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PEX5P50542 639 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 SLC27A1Q6PCB7 646 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 TLK2Q86UE8 772 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 KCNMB4Q86W47 210 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PCDHB5Q9Y5E4 795 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 MEGF6O75095 1541 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 E5RJQ4 531 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 GAKO14976 1311 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 RRM2P31350 389 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 DLG4P78352 724 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 OTUD3Q5T2D3 398 aaPredicted RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 CASP10Q92851 521 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 GLMNQ92990 594 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 FAM120BQ96EK7 910 aaKnown RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 PARVBQ9HBI1 364 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ARMCX1Q9P291 453 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SLC24A2Q9UI40 661 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ZMYM5Q9UJ78 669 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TOMM70O94826 608 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 HPGDP15428 266 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 YBX3P16989 372 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP53-201ENST00000274030 MIPP30301 263 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 GRK3P35626 688 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SLC1A6P48664 564 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 DEFA1P59665 94 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 DEFA3P59666 94 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 HERC6Q8IVU3 1022 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SYTL1Q8IYJ3 562 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 FIG4Q92562 907 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 CDCA5Q96FF9 252 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 NFKBIZQ9BYH8 718 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 RRAGCQ9HB90 399 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 MIEF1Q9NQG6 463 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TDRKHQ9Y2W6 561 aaKnown RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 CDH17Q12864 832 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 MFSD10Q14728 455 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SLC39A12Q504Y0 691 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 WDR59Q6PJI9 974 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 KCNT2Q6UVM3 1135 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TLR10Q9BXR5 811 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 CHST7Q9NS84 486 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SPACA6W5XKT8 324 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 PDZK1P1A8MUH7 402 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 ACADSP16219 412 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 SERPINB1P30740 379 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TCEA2Q15560 299 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 OASLQ15646 514 aaKnown RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 TRIP4Q15650 581 aaPredicted RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
USP53-201ENST00000274030 LGI2Q8N0V4 545 aa11.74□□□□□ -0.53
USP53-201ENST00000274030 TCF7L2Q9NQB0 619 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms