RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DUX4L5P0CJ88 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4L6P0CJ89 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4L7P0CJ90 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ALDH1A3P47895 512 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ALDH9A1P49189 494 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ST8SIA6P61647 398 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DDR2Q16832 855 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 IRGCQ6NXR0 463 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 KCNMB4Q86W47 210 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 SPATA6LQ8N4H0 392 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 NETO2Q8NC67 525 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 MED8Q96G25 268 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4Q9UBX2 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 A0A096LPK6 155 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 CCDC154A6NI56 674 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 PSMD11O00231 422 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 KPNA4O00629 521 aaPredicted RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 EPHB6O15197 1021 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 SERPINE1P05121 402 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 STAG3L1P0CL83 205 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 RXRBP28702 533 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ACSS2Q9NR19 701 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 THAP1Q9NVV9 213 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 AAR2Q9Y312 384 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 TRIM13O60858 407 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ZBTB11O95625 1053 aaPredicted RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 NCF4Q15080 339 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 TTC7BQ86TV6 843 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 KAT5Q92993 513 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DEPDC7Q96QD5 511 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 RBMX2Q9Y388 322 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 AHCYL1O43865 530 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 CCNG1P51959 295 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 CYP4F2P78329 520 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 CYP4F3Q08477 520 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 CDH18Q13634 790 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PDK2Q15119 407 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 MTFR1Q15390 333 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 IER5Q5VY09 327 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 FBXO30Q8TB52 745 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 VMP1Q96GC9 406 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 VPS45Q9NRW7 570 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 NDUFAF1Q9Y375 327 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 NTSR2O95665 410 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 RAD23AP54725 363 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 NFIAQ12857 509 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 FAM98BQ52LJ0 330 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ANGEL2Q5VTE6 544 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 TRIQKQ629K1 86 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 C4orf22Q6V702 233 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 LRRC39Q96DD0 335 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 FAR2Q96K12 515 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 MGAT5Q09328 741 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PNMA5Q96PV4 448 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 SLCO1B3Q9NPD5 702 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PRMT7Q9NVM4 692 aaPredicted RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 SH3BP4Q9P0V3 963 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 CRYL1Q9Y2S2 319 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 F8VP50 259 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 SNPHO15079 494 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 KCNK18Q7Z418 384 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 TMEM176AQ96HP8 235 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 SNX3O60493 162 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 VAPBO95292 243 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 GLP2RO95838 553 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ALDH1A1P00352 501 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 ME2P23368 584 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms