RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 A0A087X0B3 334 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 PPP1R37O75864 691 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 BGNP21810 368 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 RALGDSQ12967 914 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 NFE2Q16621 373 aaPredicted RBP12.47□□□□□ -0.41
SPG11-201ENST00000261866 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 NFASCO94856 1347 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 PLK1P53350 603 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 CRADDP78560 199 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 MED21Q13503 144 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 DDR2Q16832 855 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 TM6SF2Q9BZW4 377 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 FBXO44Q9H4M3 255 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 INTS13Q9NVM9 706 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 NCKAP1Q9Y2A7 1128 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 CTSEP14091 401 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 TRIP10Q15642 601 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 TRAPPC5Q8IUR0 188 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 PAFAH2Q99487 392 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 FEN1P39748 380 aaKnown RBP12.47□□□□□ -0.41
SPG11-201ENST00000261866 CBWD6Q4V339 395 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 ACTR8Q9H981 624 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 DNAJC16Q9Y2G8 782 aa12.47□□□□□ -0.41
SPG11-201ENST00000261866 RBAK-RBAKDNI3L0D1 243 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 B4GALT5O43286 388 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 APBA2Q99767 749 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ILKAPQ9H0C8 392 aaPredicted RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 LRRC40Q9H9A6 602 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPG11-201ENST00000261866 CTNNAL1Q9UBT7 734 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 IQCMA0A1B0GVH7 501 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 SETMARQ53H47 684 aaPredicted RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 CES5AQ6NT32 575 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 CD99L2Q8TCZ2 262 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 MAPK7Q13164 816 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ZC3H12AQ5D1E8 599 aaKnown RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 EXOC2Q96KP1 924 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 SOHLH2Q9NX45 425 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 CDY1Q9Y6F8 540 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 TBL1XO60907 577 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 KRT8P05787 483 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 TGFB3P10600 412 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.41
SPG11-201ENST00000261866 SNAP47Q5SQN1 464 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 DDI2Q5TDH0 399 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 KRT78Q8N1N4 520 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ABCG8Q9H221 673 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ELOVL6Q9H5J4 265 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 ZNHIT2Q9UHR6 403 aa12.46□□□□□ -0.41
SPG11-201ENST00000261866 DAB1O75553 588 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 HMGCRP04035 888 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.42
SPG11-201ENST00000261866 TDRD5Q8NAT2 981 aaKnown RBP12.46□□□□□ -0.42
SPG11-201ENST00000261866 SUSD6Q92537 303 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 KIAA1257Q9ULG3 409 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 ETS1P14921 441 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 BCL2L1Q07817 233 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 NFYCQ13952 458 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.42
SPG11-201ENST00000261866 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 NACC2Q96BF6 587 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 BCL9O00512 1426 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 PREX1Q8TCU6 1659 aa12.46□□□□□ -0.42
SPG11-201ENST00000261866 DYRK3O43781 588 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ATP6V1C1P21283 382 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SH3BGRP55822 239 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 HDAC4P56524 1084 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 LRIG3Q6UXM1 1119 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms