RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ACOT9Q9Y305 439 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 HBS1LQ9Y450 684 aaKnown RBP16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PCDHA2Q9Y5H9 948 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 EEF2KO00418 725 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 HMGCRP04035 888 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 CYP3A4P08684 503 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 SFSWAPQ12872 951 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 MAPK11Q15759 364 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 NCKIPSDQ9NZQ3 722 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 PPM1HQ9ULR3 514 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 SLCO1B7G3V0H7 640 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 UBDO15205 165 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 BPGMP07738 259 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 CETPP11597 493 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 FASP25445 335 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ABL2P42684 1182 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ACTR3P61158 418 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 XIAPP98170 497 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 PEX6Q13608 980 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ANKS1BQ7Z6G8 1248 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 TNIP2Q8NFZ5 429 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 NOCTQ9UK39 431 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 VAV3Q9UKW4 847 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 MYH6P13533 1939 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 GAKO14976 1311 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 GOLGA8TH3BQL2 631 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 CYP2F1P24903 491 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 DGKZQ13574 1117 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 STILQ15468 1287 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 EML3Q32P44 896 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 DHFR2Q86XF0 187 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 RCN3Q96D15 328 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ZNF839A8K0R7 811 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 ERVK-10P10266 1014 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 CCDC130P13994 396 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 LPIN1Q14693 890 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 AASDHQ4L235 1098 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 RNASEH2BQ5TBB1 312 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 PPHLN1Q8NEY8 458 aaKnown RBP16.63■□□□□ 0.25
SREBF1-201ENST00000261646 BEST2Q8NFU1 509 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 DLG3Q92796 817 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 NDEL1Q9GZM8 345 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 TRPC7Q9HCX4 862 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 CDH22Q9UJ99 828 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 SH3GLB1Q9Y371 365 aa16.63■□□□□ 0.25
SREBF1-201ENST00000261646 USP12O75317 370 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 DLGAP3O95886 979 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 OATP04181 439 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 EPHA3P29320 983 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 BFSP2Q13515 415 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 CCDC153Q494R4 210 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 HACE1Q8IYU2 909 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 PIF1Q9H611 641 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 NR5A2O00482 541 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 ICAM1P05362 532 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 VIL1P09327 827 aaKnown RBP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 TSPY1Q01534 308 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 POU5F1Q01860 360 aaKnown RBP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 C6orf52Q5T4I8 152 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 UBAP2Q5T6F2 1119 aaKnown RBP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 LRRC39Q96DD0 335 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 SEPHS2Q99611 448 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 XPNPEP3Q9NQH7 507 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 UBP1Q9NZI7 540 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 CROTQ9UKG9 612 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 RGSL1A5PLK6 1076 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 INPP4BO15327 924 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 CHADO15335 359 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 TMC7Q7Z402 723 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 HEATR4Q86WZ0 1026 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-201ENST00000261646 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 SLC4A5Q9BY07 1137 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 RMI1Q9H9A7 625 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 PTTG2Q9NZH5 202 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 AP4E1Q9UPM8 1137 aa16.62■□□□□ 0.25
SREBF1-201ENST00000261646 MRASO14807 208 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 MOCS2O96007 188 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 EIF4BP23588 611 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 NAA20P61599 178 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 DMPKQ09013 629 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 ZCCHC7Q8N3Z6 543 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 BANPQ8N9N5 519 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 DNAAF2Q9NVR5 837 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms