RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 ICAM3P32942 547 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 PDK3Q15120 406 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 RWDD4Q6NW29 188 aaKnown RBP13.74□□□□□ -0.21
PEX1-201ENST00000248633 RGMBQ6NW40 437 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 DHDDSQ86SQ9 333 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 BRI3BPQ8WY22 251 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 CCDC138Q96M89 665 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 TUBGCP5Q96RT8 1024 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 TXLNGYQ9BZA5 131 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 FAM96AQ9H5X1 160 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 MRPL42Q9Y6G3 142 aaKnown RBP13.74□□□□□ -0.21
PEX1-201ENST00000248633 RRN3P2A6NIE6 340 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 USP12O75317 370 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 NUMBP49757 651 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 SERPINB9P50453 376 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 FCGRTP55899 365 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 GALNTL6Q49A17 601 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 JOSD2Q8TAC2 188 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 CPT1BQ92523 772 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 SERAC1Q96JX3 654 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 KCNK4Q9NYG8 393 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 WDR27A2RRH5 827 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CTSHP09668 335 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 KDELR1P24390 212 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CPT1AP50416 773 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 RTP1P59025 263 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 PLOD1Q02809 727 aaPredicted RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 RALGPS1Q5JS13 557 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 RBM44Q6ZP01 1051 aaKnown RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 GALNT15Q8N3T1 639 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CYGBQ8WWM9 190 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CDRT15Q96T59 188 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 EBF3Q9H4W6 596 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 USP10Q14694 798 aaKnown RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 HPS6Q86YV9 775 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CATSPER2Q96P56 530 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 GPR20Q99678 358 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 SNX25Q9H3E2 840 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CHCHD3Q9NX63 227 aaKnown RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 EP400Q96L91 3159 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 NPTXRO95502 500 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
PEX1-201ENST00000248633 NME5P56597 212 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 SNX32Q86XE0 403 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 THAP1Q9NVV9 213 aa13.73□□□□□ -0.21
PEX1-201ENST00000248633 CSPG5O95196 566 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 HMGCRP04035 888 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 GJB1P08034 283 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
PEX1-201ENST00000248633 GRIK4Q16099 956 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 FAM81AQ8TBF8 368 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 LRRC37AA6NMS7 1700 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 PEX2P28328 305 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 ADSSP30520 456 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 HDAC4P56524 1084 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CAPSQ13938 189 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 LIN52Q52LA3 116 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 RAET1EQ8TD07 263 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 TCRBV7S3A2A0A539 114 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 MAFO75444 373 aaPredicted RBP13.72□□□□□ -0.21
PEX1-201ENST00000248633 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
PEX1-201ENST00000248633 CPA3P15088 417 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 HOXD10P28358 340 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 MLH1P40692 756 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 TNFSF9P41273 254 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 GRIK3Q13003 919 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 TAF5Q15542 800 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 NFIL3Q16649 462 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 FAM110CQ1W6H9 321 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 SLC5A9Q2M3M2 681 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 RNASEH2BQ5TBB1 312 aaKnown RBP13.72□□□□□ -0.21
PEX1-201ENST00000248633 BNC2Q6ZN30 1099 aaPredicted RBP13.72□□□□□ -0.21
PEX1-201ENST00000248633 NUP93Q8N1F7 819 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
PEX1-201ENST00000248633 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms