RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 YY1P25490 414 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 CCDC142Q17RM4 750 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 TDRD10Q5VZ19 366 aaKnown RBP20.34■□□□□ 0.85
SOX4-201ENST00000244745 TMC5Q6UXY8 1006 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 IRF2BP2Q7Z5L9 587 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 CNGB3Q9NQW8 809 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 CHN2P52757 468 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 XRCC4Q13426 336 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 TJAP1Q5JTD0 557 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 MYRFQ9Y2G1 1151 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 TPP1O14773 563 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 DCXO43602 365 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 KRT36O76013 467 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 BAIAP3O94812 1187 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ARIH2O95376 493 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 HNRNPH3P31942 346 aaKnown RBP20.33■□□□□ 0.85
SOX4-201ENST00000244745 GLB1LQ6UWU2 654 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.33■□□□□ 0.85
SOX4-201ENST00000244745 ADCK2Q7Z695 626 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 C11orf74Q86VG3 221 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ZSCAN18Q8TBC5 510 aaPredicted RBP20.33■□□□□ 0.85
SOX4-201ENST00000244745 SCUBE2Q9NQ36 999 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 XPNPEP3Q9NQH7 507 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 LACTBL1A8MY62 500 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 PRR23D1E9PI22 279 aaPredicted RBP20.33■□□□□ 0.85
SOX4-201ENST00000244745 PRR23D2P0DMB1 279 aaPredicted RBP20.33■□□□□ 0.85
SOX4-201ENST00000244745 ATP6V1C1P21283 382 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 PGS1Q32NB8 556 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ELMSAN1Q6PJG2 1045 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ANKS3Q6ZW76 656 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ALLCQ8N6M5 410 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 KCNK4Q9NYG8 393 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 VPS9D1Q9Y2B5 631 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 APOC4-APOC2K7ER74 178 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 VPS26AO75436 327 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 APOC2P02655 101 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 PROCP04070 461 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 NUDT17P0C025 328 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 ADIGQ0VDE8 80 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 PRKAA1Q13131 559 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 KRR1Q13601 381 aaKnown RBP20.33■□□□□ 0.85
SOX4-201ENST00000244745 SNX32Q86XE0 403 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 TBC1D10AQ9BXI6 508 aa20.33■□□□□ 0.85
SOX4-201ENST00000244745 A0A096LPK6 155 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 FBXO21O94952 628 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 RINLQ6ZS11 566 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 C4orf32Q8N8J7 132 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 ETNK2Q9NVF9 386 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 PSMD10O75832 226 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 ATP6AP1LQ52LC2 224 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 NET1Q7Z628 596 aaPredicted RBP20.33■□□□□ 0.84
SOX4-201ENST00000244745 EXOC3L1Q86VI1 746 aa20.33■□□□□ 0.84
SOX4-201ENST00000244745 LINC00854A0A1B0GVQ3 168 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 RNF103O00237 685 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 ENTPD5O75356 428 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 SLC2A3P11169 496 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 DCTN2Q13561 401 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 ATP13A4Q4VNC1 1196 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MIB1Q86YT6 1006 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 HASPINQ8TF76 798 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 WDR18Q9BV38 432 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 LRRC19Q9H756 370 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 COL5A2P05997 1499 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 GOLGA8TH3BQL2 631 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MZF1P28698 734 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 RGS2P41220 211 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 FMO1Q01740 532 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 CYP51A1Q16850 503 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 SLC45A4Q5BKX6 768 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 APOBEC3HQ6NTF7 200 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 BHMTQ93088 406 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 SEMA6AQ9H2E6 1030 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 UTP6Q9NYH9 597 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 CYP3A7-CYP3A51PA0A087WV96 503 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MAGEB16A2A368 324 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 TRIM13O60858 407 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 CYP3A7P24462 503 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 PAN2Q504Q3 1202 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 SLC22A9Q8IVM8 553 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 BRSK2Q8IWQ3 736 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 STX19Q8N4C7 294 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 GTF3C2Q8WUA4 911 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 TNFRSF25Q93038 417 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 VTI1BQ9UEU0 232 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 CFAP99D6REC4 459 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 MEIS2O14770 477 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 UPP2O95045 317 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 SOX6P35712 828 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 FASTKQ14296 549 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 NEDD8Q15843 81 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 IRF2BP1Q8IU81 584 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 FAM71AQ8IYT1 594 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 RAB42Q8N4Z0 105 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 WDR60Q8WVS4 1066 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 EDEM1Q92611 657 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 INPP4AQ96PE3 977 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms