RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MAB21L3Q8N8X9 362 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 CHST13Q8NET6 341 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 ZNF333Q96JL9 665 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.7
VCL-201ENST00000211998 WDR41Q9HAD4 459 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 SPON1Q9HCB6 807 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 TUBGCP4Q9UGJ1 667 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 WBP11Q9Y2W2 641 aaKnown RBP10.71□□□□□ -0.7
VCL-201ENST00000211998 C1orf167Q5SNV9 1468 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 RPS12P25398 132 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 ACADSBP45954 432 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 BNIP1Q12981 228 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 DENND5AQ6IQ26 1287 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SATL1Q86VE3 508 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 TTC30AQ86WT1 665 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 AMER2Q8N7J2 671 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 OSBPL11Q9BXB4 747 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 RIBC2Q9H4K1 309 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PTTG2Q9NZH5 202 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 RARAP10276 462 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 TUFMP49411 452 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 FASTKQ14296 549 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 QPRTQ15274 297 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 MEA1Q16626 185 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 TFDP3Q5H9I0 405 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SAMD4BQ5PRF9 694 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 AGAP9Q5VTM2 703 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 TYW3Q6IPR3 259 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 STYK1Q6J9G0 422 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SFRP1Q8N474 314 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 DCUN1D1Q96GG9 259 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PREBQ9HCU5 417 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 MADDQ8WXG6 1647 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 TSPAN4O14817 238 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 GRAP2O75791 330 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ASMTLO95671 621 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 MT-CO1P00395 513 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ABCB1P08183 1280 aaPredicted RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 RGS7P49802 495 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 TOB1P50616 345 aaPredicted RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 NT5DC3Q86UY8 548 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PROX1Q92786 737 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 CCDC126Q96EE4 140 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 HACL1Q9UJ83 578 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PRPF4O43172 522 aaKnown RBP eCLIP10.7□□□□□ -0.7
VCL-201ENST00000211998 GUCA1CO95843 209 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SRP54P61011 504 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 NCOA4Q13772 614 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PDK4Q16654 411 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 PKN3Q6P5Z2 889 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 IQCKQ8N0W5 287 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 UTP15Q8TED0 518 aaKnown RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 FIG4Q92562 907 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 KCTD10Q9H3F6 313 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 LRRC4BQ9NT99 713 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 ZNF624Q9P2J8 865 aaPredicted RBP10.7□□□□□ -0.7
VCL-201ENST00000211998 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SORCS3Q9UPU3 1222 aa10.7□□□□□ -0.7
VCL-201ENST00000211998 SDR42E2A6NKP2 422 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TIMM44O43615 452 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZMPSTE24O75844 475 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PAX3P23760 479 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 MMP13P45452 471 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PSEN1P49768 467 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 POU4F1Q01851 419 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 MPP3Q13368 585 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SV2CQ496J9 727 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 DENND5BQ6ZUT9 1274 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 IKBIPQ70UQ0 350 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZFYVE28Q9HCC9 887 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.69□□□□□ -0.76e-11■■■□□ 18.8
VCL-201ENST00000211998 ING4Q9UNL4 249 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PMF1-BGLAPU3KQ54 211 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 GSC2O15499 205 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ITGA2BP08514 1039 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 CHRNA5P30532 468 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 IST1P53990 364 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TUBA1BP68363 451 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TOP3AQ13472 1001 aaPredicted RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 SLC15A2Q16348 729 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PACS1Q6VY07 963 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ANKS3Q6ZW76 656 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TUBA1AQ71U36 451 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 UBE2Q1Q7Z7E8 422 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 DCP1BQ8IZD4 617 aaKnown RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 PCDH20Q8N6Y1 951 aaKnown RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 BPIFB6Q8NFQ5 453 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 FAM45AQ8TCE6 357 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TADA1Q96BN2 335 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms