RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Gm21964A0A1W2P7S4 437 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gm4871D3Z0W7 314 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rad51ap2G3UW63 976 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pdcd1Q02242 288 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Znf583Q3V080 568 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cyp3a16Q64481 504 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ripor1Q68FE6 1223 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sned1Q70E20 1403 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gxylt2Q810K9 444 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Qsox1Q8BND5 748 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pcdhb7Q8CDY9 829 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Trps1Q925H1 1281 aa13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ndufa10Q99LC3 355 aaKnown RBP13.62□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Klhl41A2AUC9 606 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 SelenovD3YXG1 328 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 CrymO54983 313 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mup5P11591 180 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Nos2P29477 1144 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Drg1P32233 367 aaKnown RBP13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Oprl1P35377 367 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Stx1bP61264 288 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pyroxd1Q3TMV7 498 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Smyd5Q3TYX3 416 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sema3cQ62181 751 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Arl13bQ640N2 427 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Dupd1Q8BK84 215 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tbc1d13Q8R3D1 400 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Magel2Q9QZ04 1284 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ccdc194A0A140LIT1 234 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Olfr1023A2ASU6 311 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 FaahO08914 579 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Crabp2P22935 138 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Dpep1P31428 410 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ptpn1P35821 432 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 MipP51180 263 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cage1Q5IR70 849 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ttyh3Q6P5F7 524 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Kank2Q8BX02 843 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Aldh4a1Q8CHT0 562 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Dedd2Q8QZV0 330 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Agr3Q8R3W7 165 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Caskin2Q8VHK1 1201 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Psmd12Q9D8W5 456 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mta2Q9R190 668 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Klc2O88448 599 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Slc2a4P14142 509 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Slc12a1P55014 1095 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rasgrf2P70392 1189 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Kctd8Q50H33 476 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Slc20a1Q61609 681 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tmtc4Q8BG19 741 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ccdc90bQ8C3X2 256 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rmnd1Q8CI78 450 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 NcaldQ91X97 193 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pacsin3Q99JB8 424 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rgs10Q9CQE5 181 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 DtnaQ9D2N4 746 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Atp6v1g2Q9WTT4 118 aa13.61□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Smok3aC0HKC8 504 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Smok3bC0HKC9 504 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Trim5E9PV98 497 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rap1gds1E9Q912 607 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Per3O70361 1113 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 PigrO70570 771 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ces1cP23953 554 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 PtpreP49446 699 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sult1e1P49891 295 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Lrrn4P59383 733 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Flt3Q00342 1000 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pld5Q3UNN8 536 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Abl2Q4JIM5 1182 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tab3Q571K4 716 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cntn2Q61330 1040 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tgif2lx2Q8K5B9 231 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Vangl2Q91ZD4 521 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Afg3l1Q920A7 789 aaKnown RBP13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 PrccQ9EQC8 491 aaKnown RBP13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ccr10Q9JL21 362 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Acox2Q9QXD1 681 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gucy2dA0A0U1RPR8 1117 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ism1A2ATD1 454 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Fam47eD3YWC7 402 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Vav1P27870 845 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rab21P35282 222 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Emilin3P59900 758 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Plk1Q07832 603 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pih1d3Q3KNI6 218 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gpsm1Q6IR34 673 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 MtbpQ8BJS8 894 aaKnown RBP13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Clec4gQ8BNX1 294 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Snx17Q8BVL3 470 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Snx2Q9CWK8 519 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ptpn3A2ALK8 913 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 D3Z070 196 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ercc2O08811 760 aaKnown RBP13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Nr3c1P06537 783 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Nfe2l2Q60795 597 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Papss1Q60967 624 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Galnt10Q6P9S7 603 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Prl3a1Q78Y73 227 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms