RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Lrrc42Q8R2U7 421 aa14.22□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 CatsperzQ9CQP8 194 aa14.22□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Polr3hQ9D2C6 204 aaKnown RBP14.22□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Mgea5Q9EQQ9 916 aa14.22□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Arf4P61750 180 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Clec4fP70194 548 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 HmgcrQ01237 887 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Srebf2Q3U1N2 1130 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Ccdc61Q3UJV1 511 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 MyrflQ3UN70 904 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Krt42Q6IFX2 452 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Dis3lQ8C0S1 1053 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Q8CCC3 530 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Sorcs3Q8VI51 1219 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Mettl16Q9CQG2 553 aaKnown RBP14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 CdylQ9WTK2 593 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Sdccag3A2AIW0 432 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Mfsd4b4J3QNS5 503 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 PgfP49764 158 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Ccng1P51945 294 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 MyrfQ3UR85 1138 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Armcx5Q3UZB0 606 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Prmt6Q6NZB1 378 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 R3hdm2Q80TM6 1044 aaKnown RBP14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 4921511C20RikQ8BVT7 469 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Slc15a5Q8CBB2 566 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 Fam187aQ9D3R5 417 aa14.21□□□□□ -0.13
Pcdha1-202ENSMUST00000193839 A0A1Y7VP24 259 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 PdgfaP20033 211 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Acvr2bP27040 536 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Psmb9P28076 219 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Cpa1Q7TPZ8 419 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Zfp263Q8CF60 680 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Ppp6r2Q8R3Q2 923 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pglyrp2Q8VCS0 530 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 TgdsQ8VDR7 355 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pcdhb19Q91Y01 801 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Zswim7Q9CWQ2 152 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 MtrexQ9CZU3 1040 aaKnown RBP14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Dcun1d1Q9QZ73 259 aa14.21□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Mcpt4P21812 246 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Plk1Q07832 603 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pcgf5Q3UK78 256 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Trpc1Q61056 793 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Klra3Q64329 266 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Srd5a1Q68FF9 255 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Mcph1Q7TT79 822 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Dnali1Q8BVN8 258 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Camkk2Q8C078 588 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Snrnp25Q8VIK1 123 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pdxdc1Q99K01 787 aaKnown RBP14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 B4galt5Q9JMK0 388 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 BcorQ8CGN4 1759 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Dthd1E9PZX1 795 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Srp72F8VQC1 671 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Abhd12bG3UZN6 359 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Smad1P70340 465 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Spink5Q148R4 1017 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Tespa1Q3U132 458 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Prom2Q3UUY6 835 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 WhammQ571B6 793 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 ScinQ60604 715 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Cd37Q61470 281 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Lrrc8eQ66JT1 795 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Trim35Q8C006 501 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 ItchQ8C863 864 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Fbxl13Q8CDU4 790 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 P3h2Q8CG71 703 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Erich5Q8K0S2 362 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Serpina3nQ91WP6 418 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Tnfsf13bQ9WU72 309 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Iqcj-Schip1A0A088MLT8 559 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Gm43518A0A0G2JGB6 165 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Gm3402K7N5P2 326 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Schip1P0DPB4 484 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 FechP22315 420 aaKnown RBP14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pkn1P70268 946 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Gspt2Q149F3 632 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Pramel7Q810Y8 479 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Hspa13Q8BM72 471 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Tmtc3Q8BRH0 920 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Snrnp27Q8K194 155 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Abtb1Q99LJ2 478 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Chit1Q9D7Q1 464 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Gm21964A0A1W2P7S4 437 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Zfp472B0V2W5 534 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Spin2fJ3QPU0 254 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Gm3248K7N721 186 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Psmc3O88685 442 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 CcnjlQ5SRT8 387 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Fastkd1Q6DI86 829 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 CyldQ80TQ2 952 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Elmo2Q8BHL5 732 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Wdr11Q8K1X1 1223 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Lrrc57Q9D1G5 239 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Timm50Q9D880 353 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Spata9Q9D9R3 252 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Prl2b1Q9DAZ2 228 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Tlr6Q9EPW9 795 aa14.2□□□□□ -0.14
Pcdha1-202ENSMUST00000193839 Fads3Q9JJE7 449 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms