RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Klra6Q60653 266 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Kpna1Q60960 538 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nab1Q61122 486 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Gga2Q6P5E6 603 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Mis18bp1Q80WQ8 998 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Dusp4Q8BFV3 398 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Zdhhc12Q8VC90 267 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Dapk2Q8VDF3 370 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nmd3Q99L48 503 aaKnown RBP12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 GsdmcQ99NB5 468 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Fam227bQ9D518 532 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tspan3Q9QY33 253 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Hecw2Q6I6G8 1578 aa12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ahdc1Q6PAL7 1594 aaKnown RBP12.74□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Scgb2b21A0A087WQA9 112 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Slfn3A0A1L1STQ7 640 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tlr8P58682 1032 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Itga4Q00651 1039 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 PhgdhQ61753 533 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Naif1Q6PFD7 327 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tmem154Q8C4Q9 181 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Smap1Q91VZ6 440 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 MsraQ9D6Y7 233 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 RhoaQ9QUI0 193 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Crb1Q8VHS2 1405 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 EXOC1LB9EK06 172 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pabpc1P29341 636 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Serpina6Q06770 397 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 1700061G19RikQ08EE8 705 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Spata5Q3UMC0 893 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Samd4bQ80XS6 687 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Atg4cQ811C2 458 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Abi3Q8BYZ1 367 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Parp9Q8CAS9 866 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Rftn2Q8CHX7 500 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Sgsm3Q8VCZ6 750 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pdk3Q922H2 415 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Oxct1Q9D0K2 520 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Syndig1A2ANU3 258 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Gm10134F6ZQC6 126 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pik3r2O08908 722 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Acot1O55137 419 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 HmbsP22907 361 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Vps26aP40336 327 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 InaP46660 501 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ceacam5Q3UKK2 947 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Sel1l2Q3V172 688 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Gcnt3Q5JCT0 437 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ezh2Q61188 746 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 TsnQ62348 228 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Clca4aQ6Q473 924 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pip5kl1Q6U7H8 395 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Fam126bQ8C729 530 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 TgdsQ8VDR7 355 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ndfip2Q91ZP6 311 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Far1Q922J9 515 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Duoxa2Q9D311 320 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Vnn1Q9Z0K8 512 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Reps1O54916 795 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 AurkbO70126 345 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Magea5O89009 320 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Magea8O89012 320 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 TraddQ3U0V2 310 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nat9Q3UG98 241 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nat8lQ3UGX3 299 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 StilQ60988 1262 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ints6Q6PCM2 883 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 1700001J03RikQ80ZR8 219 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Trim50Q810I2 483 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tcaf1Q8BNE1 924 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 UstQ8BUB6 407 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Znf451Q8C0P7 1056 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Acvr1cQ8K348 493 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 RorbQ8R1B8 470 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nusap1Q9ERH4 427 aaKnown RBP12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Ak1Q9R0Y5 194 aa12.73□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Xlr5bA2BI50 236 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Slc4a5E9Q3M5 1116 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Vmn2r39L7N2E5 861 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 TecP24604 630 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Kcnj6P48542 425 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pkn1P70268 946 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 AurkaP97477 395 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Cdk16Q04735 496 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tespa1Q3U132 458 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Proser1Q5PRE5 913 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Angel1Q8VCU0 667 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 TpbpbQ9CQC0 121 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Txndc12Q9CQU0 170 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 PfasQ5SUR0 1337 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pcdh7A0A0A6YY83 1255 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Tnk2O54967 1055 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Psmc6P62334 389 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Aak1Q3UHJ0 959 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 VwdeQ6DFV8 926 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Mief1Q8BGV8 463 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Pcyox1lQ8C7K6 495 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Snapc2Q91XA5 359 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Nrif2Q921B4 824 aa12.72□□□□□ -0.37
Ssh1-202ENSMUST00000112298 Acot13Q9CQR4 140 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms