RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 UrosP51163 265 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmprss9P69525 1065 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TankP70347 448 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nlrc4Q3UP24 1024 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Odr4Q4PJX1 447 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hepacam2Q4VAH7 463 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cldn11Q60771 207 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Stip1Q60864 543 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ssr4Q62186 172 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 GkQ64516 559 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ints2Q80UK8 1198 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Abi3Q8BYZ1 367 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ulbp1Q8HWA3 334 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spata2Q8K004 515 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Unc5bQ8K1S3 945 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc35f6Q8VE96 372 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 FtcdQ91XD4 541 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MrgbpQ9DAT2 204 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Krt27Q9Z320 448 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Col6a3E9PWQ3 3284 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4930402K13RikB1AW18 415 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Serpina3iD3Z450 408 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vmn2r115E9Q0E7 857 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pate1E9Q658 125 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TpteG5E8H5 664 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mllt10O54826 1068 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rpl7aP12970 266 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rps6ka1P18653 724 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Adrb1P34971 466 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Bdkrb1Q61125 334 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sema4cQ64151 834 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fbxw21Q8BI38 468 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam118bQ8C569 351 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zc2hc1cQ8CCG1 527 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gtpbp10Q8K013 366 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mcoln2Q8K595 566 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr697Q8VFM4 317 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc65Q8VHI7 493 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pth2rQ91V95 546 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Serpina3nQ91WP6 418 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rgs19Q9CX84 216 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atg7Q9D906 698 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ddx21Q9JIK5 851 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Abca4O35600 2310 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Col12a1Q60847 3120 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nlrp1bA1Z198 1177 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Klhl41A2AUC9 606 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MndalD0QMC3 538 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Soat2O88908 525 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zfy1P10925 782 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ptk2P34152 1090 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Usp10P52479 792 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Upp1P52624 311 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 AdprhP54923 362 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam172aQ3TNH5 417 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dab2ipQ3UHC7 1189 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Krt12Q64291 487 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 A430089I19RikQ8C9W1 407 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam228aQ8CDW1 299 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vmn1r206Q8R277 312 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Frmd4bQ920B0 1035 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 HnrnpllQ921F4 591 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm27029A2A4P4 543 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mfsd4b4J3QNS5 503 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm3642K7N6V4 267 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Arl4aP61213 200 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nudt18Q3U2V3 323 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Eri2Q5BKS4 688 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Taok1Q5F2E8 1001 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ltbp3Q61810 1268 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gpr17Q6NS65 339 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Prr18Q6PAN7 307 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Chn2Q80XD1 332 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc41a2Q8BYR8 573 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gpr61Q8C010 449 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dtnbp1Q91WZ8 352 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 NamptQ99KQ4 491 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Scnn1gQ9WU39 655 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Eif2ak3Q9Z2B5 1114 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Kcna10B2RQA1 511 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 A930018M24RikB7ZMY3 218 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 E230025N22RikG5E8S3 482 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hoxb8P09632 243 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ap2a2P17427 938 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tdrd6P61407 2134 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fut7Q11131 389 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam193bQ3U2K0 892 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Map2k2Q63932 401 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gpr151Q7TSN6 422 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sit1Q8C503 180 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tspan33Q8R3S2 283 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mfsd10Q9D2V8 456 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Necab3Q9D6J4 353 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Capn9Q9D805 690 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pebp4Q9D9G2 242 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Piwil1Q9JMB7 862 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sema4fQ9Z123 777 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 0610012G03RikA0A0J9YTR2 95 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4933424G06RikA0A140LIP3 267 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc175E9PVB3 822 aa7.12□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms