RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 RgnQ64374 299 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fastkd1Q6DI86 829 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Elac2Q80Y81 831 aaKnown RBP10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ints6lQ8BND4 861 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ccdc90bQ8C3X2 256 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fam212aQ9CX62 282 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Zfp623Q9CY99 499 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Noxred1Q9D3S5 366 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Clic3Q9D7P7 237 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Psmd12Q9D8W5 456 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 MrgbpQ9DAT2 204 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ppp2r3cQ9JK24 453 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Dbn1Q9QXS6 706 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Tle6Q9WVB3 581 aa10.63□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gm12394A2AKP6 982 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Kif6E9PX57 802 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Shmt1P50431 478 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Krt6aP50446 553 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 NcstnP57716 708 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Elf3Q3UPW2 391 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Psg28Q4KL66 472 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Stxbp5lQ5DQR4 1185 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Krt32Q62168 407 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Papd5Q68ED3 633 aaKnown RBP10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Kctd12bQ8C7J6 292 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Trim32Q8CH72 655 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Iqsec1Q8R0S2 961 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fam114a2Q8VE88 497 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Trim7Q923T7 510 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Map4k3Q99JP0 894 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 GatbQ99JT1 557 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ubxn2aQ99KJ0 258 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Pgm3Q9CYR6 542 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 1700123K08RikQ9D991 295 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Tmem115Q9WUH1 350 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Efcab12V9GXH0 673 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Robo3Q9Z2I4 1366 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gm6370A0A0G2JGX9 315 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fbxl18E9PYR1 771 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Erich2E9Q1A6 463 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gm6309L7N481 315 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Top3aO70157 1003 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 ShdO88834 343 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Elk4P41158 430 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Abce1P61222 599 aaKnown RBP10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Lhx5P61375 402 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gpd1lQ3ULJ0 351 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fam160a1Q505K2 1081 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Pde1aQ61481 565 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Utp14bQ6EJB6 756 aaKnown RBP10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 DcstampQ7TNJ0 470 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ankrd45Q810N6 248 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Enpp4Q8BTJ4 456 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Pacs1Q8K212 961 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Snx15Q91WE1 337 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Prkag2Q91WG5 566 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fam227bQ9D518 532 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Trim54Q9ERP3 366 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Akr1c12Q9JLI0 323 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Nrf1Q9WU00 503 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Scn9aQ62205 1984 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gm6657A0A1B0GRJ3 277 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 2610028H24RikG5E8K1 270 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Mtco1P00397 514 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Hoxc6P10629 235 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Hoxc10P31257 342 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ccr1P51675 355 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Parp3Q3ULW8 533 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 CttnQ60598 546 aaKnown RBP10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Abhd10Q6PE15 297 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Olfr1057Q7TR75 315 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Olfr798Q7TRH8 311 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Taf1Q80UV9 1891 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Daam1Q8BPM0 1077 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 ClmnQ8C5W0 1052 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Hkdc1Q91W97 915 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Pcyox1Q9CQF9 505 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Klhl35Q9CZ49 574 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ubxn11Q9D572 484 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Rfx5Q9JL61 658 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Rasgrp2Q9QUG9 608 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Cpsf3Q9QXK7 684 aa10.62□□□□□ -0.71
Trim17-201ENSMUST00000047697 Zfc3h1B2RT41 1992 aaKnown RBP10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Armt1A6H630 439 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 F6Y6L6 278 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Gm10801F7C7Q0 168 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Hmgb2P30681 210 aaKnown RBP10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 ItgavP43406 1044 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fmo3P97501 534 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Pdcd1Q02242 288 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Itga1Q3V3R4 1179 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Cyp2c67Q569X9 491 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Arhgap10Q6Y5D8 786 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Fra10ac1Q8BP78 315 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Alas1Q8VC19 642 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Spata1Q9D5R4 444 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ggps1Q9WTN0 300 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Ern2Q9Z2E3 911 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Arhgef26D3YYY8 869 aa10.61□□□□□ -0.71
Trim17-201ENSMUST00000047697 Olfr220E9Q050 325 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms