RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 INTUQ9ULD6 942 aa9.85□□□□□ -0.83
PHGDH-228ENST00000641847 YIPF1Q9Y548 306 aa9.85□□□□□ -0.83
PHGDH-228ENST00000641847 USP27XA6NNY8 438 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 HHLA1C9JL84 531 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 PRRG1O14668 218 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 PJA2O43164 708 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CCP110O43303 1012 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RPP40O75818 363 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 GABBR2O75899 941 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 EPN2O95208 641 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 LRG1P02750 347 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CYP1A2P05177 515 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RHOP08100 348 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CHRNB1P11230 501 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ATF2P15336 505 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 PTPN2P17706 415 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 PSMC3P17980 439 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ATF6P18850 670 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ELF1P32519 619 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ACADSBP45954 432 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 GABRB2P47870 512 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RPL34P49207 117 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 TUFMP49411 452 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 KPNA1P52294 538 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 SLC5A3P53794 718 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 MLLT6P55198 1093 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 SNX16P57768 344 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 KIF5AQ12840 1032 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CCDC6Q16204 474 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 DDR2Q16832 855 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RAB41Q5JT25 222 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 OR6B2Q6IFH4 312 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 TMEM110Q86TL2 294 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 XYLT1Q86Y38 959 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 YAF2Q8IY57 180 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CCAR2Q8N163 923 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ZNF687Q8N1G0 1237 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 KIAA1524Q8TCG1 905 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 GAB3Q8WWW8 586 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 C18orf8Q96DM3 657 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 VCPIP1Q96JH7 1222 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 PLA2G2FQ9BZM2 168 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 UBXN6Q9BZV1 441 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 TSGA10Q9BZW7 698 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 LACRTQ9GZZ8 138 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 MIS12Q9H081 205 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 LRRC4Q9HBW1 653 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 ZNF334Q9HCZ1 680 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 AVENQ9NQS1 362 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 RXFP3Q9NSD7 469 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 HCFC1R1Q9NWW0 138 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 TRMT1Q9NXH9 659 aaKnown RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 MYO1AQ9UBC5 1043 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 HSFX1Q9UBD0 423 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 TRIM10Q9UDY6 481 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 CHORDC1Q9UHD1 332 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-228ENST00000641847 MAFFQ9ULX9 164 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 AKAP13Q12802 2813 aa9.84□□□□□ -0.83
PHGDH-228ENST00000641847 MAST4O15021 2626 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 GOLGA8SH3BPF8 625 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 TNFRSF10BO14763 440 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 PAPSS1O43252 624 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 CEACAM1P13688 526 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 RDXP35241 583 aaKnown RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 MPLP40238 635 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 ARHGAP25P42331 645 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 TKTL1P51854 596 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 GSCP56915 257 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 TWF1Q12792 350 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 PLD1Q13393 1074 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 FAM102AQ5T9C2 384 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 OLFML1Q6UWY5 402 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 PDZD4Q76G19 769 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 ZSCAN30Q86W11 494 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 ZDHHC17Q8IUH5 632 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 TCEAL8Q8IYN2 117 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 ELMOD1Q8N336 334 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 C3orf20Q8ND61 904 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 GIPC2Q8TF65 315 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 CLEC4CQ8WTT0 213 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 RFFLQ8WZ73 363 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 E2F7Q96AV8 911 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 PIWIL1Q96J94 861 aaKnown RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 SPATA17Q96L03 361 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 NUP85Q9BW27 656 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 ULBP1Q9BZM6 244 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 C8orf33Q9H7E9 229 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 LZTFL1Q9NQ48 299 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
PHGDH-228ENST00000641847 KCND1Q9NSA2 647 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 SCINQ9Y6U3 715 aa9.83□□□□□ -0.84
PHGDH-228ENST00000641847 RALGAPA1Q6GYQ0 2036 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 A0A0A6YYK5 440 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 TCRBV5S1A1TA0A578 114 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 MACROD2A1Z1Q3 448 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms