RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 PPP3CCP48454 512 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ELF3P78545 371 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 HIC1Q14526 733 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 JADE1Q6IE81 842 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TMEM270Q6UE05 265 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ZBTB8BQ8NAP8 495 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 SUSD3Q96L08 255 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 NDNQ99608 321 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 SEMA6BQ9H3T3 888 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PLGRKTQ9HBL7 147 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CTNNAL1Q9UBT7 734 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 RABL2BQ9UNT1 228 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 BACE2Q9Y5Z0 518 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TRIM49BA6NDI0 452 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ZBTB42B2RXF5 422 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 HNRNPCL2B2RXH8 293 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 SLC9A3R1O14745 358 aaPredicted RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 SOD2P04179 222 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 MGAT3Q09327 533 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 MKRN4PQ13434 485 aaPredicted RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 MEA1Q16626 185 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PUS10Q3MIT2 529 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 ARL13BQ3SXY8 428 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TMEM63BQ5T3F8 832 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 FOXR1Q6PIV2 292 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ERICH1Q86X53 443 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 YAF2Q8IY57 180 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ACBD6Q9BR61 282 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 KRT82Q9NSB4 513 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 GALNT8Q9NY28 637 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TLK1Q9UKI8 766 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 COQ4Q9Y3A0 265 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 OTOFQ9HC10 1997 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PTPRFP10586 1907 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TMEM191CA6NGB0 347 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 H0Y626 953 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TTI1O43156 1089 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 NBNO60934 754 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 MYBL1P10243 752 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 CD58P19256 250 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ARFIP2P53365 341 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PPIDQ08752 370 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 ART3Q13508 389 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 EFHC1Q5JVL4 640 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 CHRDL2Q6WN34 429 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 SLC26A7Q8TE54 656 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 HSFY1Q96LI6 401 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 VRTNQ9H8Y1 702 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PKD2L2Q9NZM6 624 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 RABL2AQ9UBK7 228 aaPredicted RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 AFF4Q9UHB7 1163 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 ZNF180Q9UJW8 692 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 L1RE1Q9UN81 338 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 POLIQ9UNA4 740 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 HBS1LQ9Y450 684 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 H0YGN5 161 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ECEL1O95672 775 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 LSM8O95777 96 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 CDC25CP30307 473 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PPARGP37231 505 aaPredicted RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 SLCO1A2P46721 670 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 AARSP49588 968 aaKnown RBP eCLIP5.86□□□□□ -1.47
RTTN-218ENST00000640408 BCAR1P56945 870 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 CYP27A1Q02318 531 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PDAP1Q13442 181 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 TSC22D1Q15714 1073 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 C9orf57Q5W0N0 161 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 IGSF21Q96ID5 467 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 MINDY3Q9H8M7 445 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 DAPK2Q9UIK4 370 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 ITIH6Q6UXX5 1313 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 A0A0G2JND7 137 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 F9P00740 461 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 SERPING1P05155 500 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 GALTP07902 379 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 HNRNPA1P09651 372 aaKnown RBP eCLIP5.86□□□□□ -1.47
RTTN-218ENST00000640408 KIF11P52732 1056 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 LRRC8BQ6P9F7 803 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 C1orf131Q8NDD1 294 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 MAML1Q92585 1016 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TIMMDC1Q9NPL8 285 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 TLR9Q9NR96 1032 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 OLA1Q9NTK5 396 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 ZNF446Q9NWS9 450 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 COMMD8Q9NX08 183 aa5.86□□□□□ -1.47
RTTN-218ENST00000640408 DDX43Q9NXZ2 648 aaKnown RBP5.86□□□□□ -1.47
RTTN-218ENST00000640408 C16orf96A6NNT2 1141 aa5.85□□□□□ -1.47
RTTN-218ENST00000640408 F8VZ95 297 aa5.85□□□□□ -1.47
RTTN-218ENST00000640408 CLPTM1O96005 669 aa5.85□□□□□ -1.47
RTTN-218ENST00000640408 S100A9P06702 114 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms