RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 LRRC63Q05C16 580 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 ZNF33AQ06730 810 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 STIM1Q13586 685 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 BECN1Q14457 450 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 GEN1Q17RS7 908 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 FYB2Q5VWT5 728 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 ISM2Q6H9L7 571 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 SLC23A3Q6PIS1 610 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 KIAA1324Q6UXG2 1013 aaKnown RBP13.21□□□□□ -0.29
PTPN11-206ENST00000635652 CEP76Q8TAP6 659 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 UBA3Q8TBC4 463 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 RNF139Q8WU17 664 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 P2RY11Q96G91 374 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 MRGPRX1Q96LB2 322 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
PTPN11-206ENST00000635652 GTPBP4Q9BZE4 634 aaKnown RBP13.21□□□□□ -0.29
PTPN11-206ENST00000635652 FBXO10Q9UK96 956 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 SLC6A14Q9UN76 642 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 PSMA7O14818 248 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 PENKP01210 267 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 VDRP11473 427 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 CEACAM1P13688 526 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 HOXD12P35452 270 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 SHC2P98077 582 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 BST2Q10589 180 aaKnown RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 ZC3H3Q8IXZ2 948 aaKnown RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 DEFB124Q8NES8 71 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 UCMAQ8WVF2 138 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 EDEM1Q92611 657 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 PLD4Q96BZ4 506 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 OLA1Q9NTK5 396 aaKnown RBP13.2□□□□□ -0.3
PTPN11-206ENST00000635652 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
PTPN11-206ENST00000635652 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 KNL1Q8NG31 2342 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 NPC1O15118 1278 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
PTPN11-206ENST00000635652 TSPAN3O60637 253 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 LCP1P13796 627 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
PTPN11-206ENST00000635652 TBXAS1P24557 533 aaPredicted RBP13.19□□□□□ -0.3
PTPN11-206ENST00000635652 NUCB2P80303 420 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 ARID5AQ03989 594 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 FOXC1Q12948 553 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 FUT11Q495W5 492 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
PTPN11-206ENST00000635652 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 RABEPKQ7Z6M1 372 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SLC41A1Q8IVJ1 513 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SPATA20Q8TB22 786 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CIPCQ9C0C6 399 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 METTL14Q9HCE5 456 aaKnown RBP13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CD93Q9NPY3 652 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 PCDHB4Q9Y5E5 795 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 IGF2RP11717 2491 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 AKAP13Q12802 2813 aa13.19□□□□□ -0.3
PTPN11-206ENST00000635652 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 E7ENQ6 273 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 PIK3R2O00459 728 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 SERPINF2P08697 491 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 IL12RB1P42701 662 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 FMO5P49326 533 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 ZNF132P52740 706 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 CETN1Q12798 172 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 E2F5Q15329 346 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
PTPN11-206ENST00000635652 MPPE1Q53F39 396 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 KLHL10Q6JEL2 608 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 TMEM270Q6UE05 265 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms