RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 C15orf59Q2T9L4 293 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 PARM1Q6UWI2 310 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 CMTM8Q8IZV2 173 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 FGF14Q92915 247 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 CYP2S1Q96SQ9 504 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 FAM204AQ9H8W3 233 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 DDIT4Q9NX09 232 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 TRMT1Q9NXH9 659 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 SFMBT1Q9UHJ3 866 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 RASAL2Q9UJF2 1139 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 GUCA1BQ9UMX6 200 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 IRAK2O43187 625 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 DCXO43602 365 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 F9P00740 461 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 CKMP06732 381 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 GBP1P32455 592 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 MAN1A1P33908 653 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 KPNA1P52294 538 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 ATP11AP98196 1134 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 MTSS1LQ765P7 747 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 ADAM32Q8TC27 787 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 FAM172AQ8WUF8 416 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 NCAPGQ9BPX3 1015 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 CALCOCO1Q9P1Z2 691 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 SORCS3Q9UPU3 1222 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 HBS1LQ9Y450 684 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 PAXBP1Q9Y5B6 917 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
PDLIM2-221ENST00000622702 USP27XA6NNY8 438 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 BUB1BO60566 1050 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 MBL2P11226 248 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 RDXP35241 583 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 NAP1L1P55209 391 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 HDAC4P56524 1084 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 MESDQ14696 234 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 TRIP4Q15650 581 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 FAM78AQ5JUQ0 283 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 SH3PXD2AQ5TCZ1 1133 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 C11orf63Q6NUN7 778 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 MIB1Q86YT6 1006 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 ZSCAN18Q8TBC5 510 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 NXPE3Q969Y0 559 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 ZFRQ96KR1 1074 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 ASB16Q96NS5 453 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 RPP25Q9BUL9 199 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 KLF16Q9BXK1 252 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 ARHGAP26Q9UNA1 814 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 TLR6Q9Y2C9 796 aa20.64■□□□□ 0.89
PDLIM2-221ENST00000622702 MSI1O43347 362 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 RNF8O76064 485 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 MOCS3O95396 460 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 ALADP13716 330 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 AVPR1AP37288 418 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 COG7P83436 770 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 DEUP1Q05D60 604 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 RING1Q06587 406 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 TDGQ13569 410 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 CDO1Q16878 200 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 ARFGAP1Q8N6T3 406 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 SMARCD2Q92925 531 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC39A13Q96H72 371 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 PIGVQ9NUD9 493 aa20.63■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC12A8A0AV02 714 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 GRID2IPA4D2P6 1211 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 PI4K2BG5E9Z4 385 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 LRCH4O75427 683 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 IGLV3-27P01718 113 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 PCK1P35558 622 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC1A1P43005 524 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 CXCR3P49682 368 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 TBX4P57082 545 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 NME3Q13232 169 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 TANGO2Q6ICL3 276 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC44A3Q8N4M1 653 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 LRRC57Q8N9N7 239 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 KXD1Q9BQD3 176 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 EPHX3Q9H6B9 360 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 CPQQ9Y646 472 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 CAPN6Q9Y6Q1 641 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 TMEM110-MUSTN1A8MSY1 372 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 FCARP24071 287 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 PPP2R5DQ14738 602 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SND1Q7KZF4 910 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SLFN11Q7Z7L1 901 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 ARID3BQ8IVW6 561 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 USP13Q92995 863 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 PLD4Q96BZ4 506 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 FCRL2Q96LA5 508 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 TRPV4Q9HBA0 871 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 TDP1Q9NUW8 608 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SMPD4Q9NXE4 827 aa20.62■□□□□ 0.89
PDLIM2-221ENST00000622702 SYNJ2BP-COX16A0A087WUM0 186 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC2A3P11169 496 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 TCF3P15923 654 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 CCR1P32246 355 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 VIPR2P41587 438 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 ATXN1P54253 815 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 ZXDAP98168 799 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms