RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PPP3CCP48454 512 aa16.59■□□□□ 0.25
GABRB3-215ENST00000622697 AGKQ53H12 422 aa16.59■□□□□ 0.25
GABRB3-215ENST00000622697 KCNMB4Q86W47 210 aa16.59■□□□□ 0.25
GABRB3-215ENST00000622697 TMPRSS6Q8IU80 811 aa16.59■□□□□ 0.25
GABRB3-215ENST00000622697 GTF3C2Q8WUA4 911 aaPredicted RBP16.59■□□□□ 0.25
GABRB3-215ENST00000622697 FBXO32Q969P5 355 aa16.59■□□□□ 0.25
GABRB3-215ENST00000622697 UTP6Q9NYH9 597 aaKnown RBP16.59■□□□□ 0.25
GABRB3-215ENST00000622697 DCXO43602 365 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 SMNDC1O75940 238 aaKnown RBP eCLIP16.58■□□□□ 0.25
GABRB3-215ENST00000622697 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.25
GABRB3-215ENST00000622697 MRNIPQ6NTE8 343 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 ALLCQ8N6M5 410 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 PPP1R2P1Q96PQ5 205 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 SYT15Q9BQS2 421 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 PIDD1Q9HB75 910 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 TMEM51Q9NW97 253 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 TRMT6Q9UJA5 497 aaKnown RBP16.58■□□□□ 0.25
GABRB3-215ENST00000622697 FARP1Q9Y4F1 1045 aaPredicted RBP16.58■□□□□ 0.25
GABRB3-215ENST00000622697 DDX3YO15523 660 aaKnown RBP16.58■□□□□ 0.25
GABRB3-215ENST00000622697 TSPAN3O60637 253 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 CAPSQ13938 189 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 PTK2BQ14289 1009 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 DMC1Q14565 340 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 STKLD1Q8NE28 680 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 ECSITQ9BQ95 431 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 TTYH3Q9C0H2 523 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 ASB7Q9H672 318 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 ETNK2Q9NVF9 386 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 PDP2Q9P2J9 529 aa16.58■□□□□ 0.25
GABRB3-215ENST00000622697 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 ERI2A8K979 691 aaKnown RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 AVILO75366 819 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 NOMO3P69849 1222 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 ADARB2Q9NS39 739 aaKnown RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 THAP1Q9NVV9 213 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 SLIT3O75094 1523 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 GP5P40197 560 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 LAMB3Q13751 1172 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 FAM183BPQ6ZVS7 135 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 CENPTQ96BT3 561 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 KLHL4Q9C0H6 718 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 RIC8BQ9NVN3 520 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 H0Y626 953 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 B4GALT5O43286 388 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 TBC1D4O60343 1298 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 SOAT2O75908 522 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 VAPBO95292 243 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 CYBBP04839 570 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 SERPINE1P05121 402 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 HOXD10P28358 340 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 PLK1P53350 603 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 CDK16Q00536 496 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 SLC51AQ86UW1 340 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 NMD3Q96D46 503 aaKnown RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
GABRB3-215ENST00000622697 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.24
GABRB3-215ENST00000622697 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 POLNQ7Z5Q5 900 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 MIER2Q8N344 545 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 OTULINQ96BN8 352 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 HPS4Q9NQG7 708 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 NUDT17P0C025 328 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 RGS4P49798 205 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SNX17Q15036 470 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 MAPRE1Q15691 268 aaKnown RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 ZC3H12AQ5D1E8 599 aaKnown RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 TBCBQ99426 244 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 NCKIPSDQ9NZQ3 722 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 LSM7Q9UK45 103 aaKnown RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 A0A1W2PPM1 405 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 GTF2A2P52657 109 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 OAZ1P54368 228 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SLC27A1Q6PCB7 646 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 TAGAPQ8N103 731 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 R3HDM2Q9Y2K5 976 aaKnown RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 USP17L7P0C7H9 530 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 PGAM1P18669 254 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 ADORA2AP29274 412 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SLC34A1Q06495 639 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 CRLS1Q9UJA2 301 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 SLC12A8A0AV02 714 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 TM4SF1P30408 202 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 CACNA2D1P54289 1103 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 FKBP1AP62942 108 aaKnown RBP16.57■□□□□ 0.24
GABRB3-215ENST00000622697 WASHC2DQ5SRD0 308 aa16.57■□□□□ 0.24
GABRB3-215ENST00000622697 TPP1O14773 563 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PHGDHO43175 533 aaKnown RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 NCKAP1LP55160 1127 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZACNQ401N2 412 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms