RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 PPFIA2O75334 1257 aa21.32■■□□□ 1
SDHA-220ENST00000617470 TFE3P19532 575 aaPredicted RBP21.32■■□□□ 1
SDHA-220ENST00000617470 SNX16P57768 344 aa21.32■■□□□ 1
SDHA-220ENST00000617470 RPL10AP62906 217 aaKnown RBP21.32■■□□□ 1
SDHA-220ENST00000617470 ATP11AP98196 1134 aa21.32■■□□□ 1
SDHA-220ENST00000617470 CDO1Q16878 200 aa21.32■■□□□ 1
SDHA-220ENST00000617470 HSP90B2PQ58FF3 399 aa21.32■■□□□ 1
SDHA-220ENST00000617470 CFAP58Q5T655 872 aa21.32■■□□□ 1
SDHA-220ENST00000617470 CCDC149Q6ZUS6 474 aa21.32■■□□□ 1
SDHA-220ENST00000617470 SYDE1Q6ZW31 735 aaPredicted RBP21.32■■□□□ 1
SDHA-220ENST00000617470 ZMIZ2Q8NF64 920 aa21.32■■□□□ 1
SDHA-220ENST00000617470 GIPC2Q8TF65 315 aa21.32■■□□□ 1
SDHA-220ENST00000617470 CSNK1G1Q9HCP0 422 aa21.32■■□□□ 1
SDHA-220ENST00000617470 MAFFQ9ULX9 164 aa21.32■■□□□ 1
SDHA-220ENST00000617470 MTCH2Q9Y6C9 303 aa21.32■■□□□ 1
SDHA-220ENST00000617470 ENDOD1O94919 500 aa21.31■■□□□ 1
SDHA-220ENST00000617470 C8AP07357 584 aa21.31■■□□□ 1
SDHA-220ENST00000617470 SCNN1AP37088 669 aa21.31■■□□□ 1
SDHA-220ENST00000617470 ARSEP51690 589 aa21.31■■□□□ 1
SDHA-220ENST00000617470 DHX9Q08211 1270 aaKnown RBP21.31■■□□□ 1
SDHA-220ENST00000617470 IFRD2Q12894 506 aaPredicted RBP21.31■■□□□ 1
SDHA-220ENST00000617470 ODF2Q5BJF6 829 aa21.31■■□□□ 1
SDHA-220ENST00000617470 DRICH1Q6PGQ1 229 aaPredicted RBP21.31■■□□□ 1
SDHA-220ENST00000617470 GRK7Q8WTQ7 553 aa21.31■■□□□ 1
SDHA-220ENST00000617470 SLC22A17Q8WUG5 538 aa21.31■■□□□ 1
SDHA-220ENST00000617470 HSPH1Q92598 858 aa21.31■■□□□ 1
SDHA-220ENST00000617470 LRRC45Q96CN5 670 aa21.31■■□□□ 1
SDHA-220ENST00000617470 INSL5Q9Y5Q6 135 aa21.31■■□□□ 1
SDHA-220ENST00000617470 PLXNA3P51805 1871 aa21.31■■□□□ 1
SDHA-220ENST00000617470 RNF40O75150 1001 aa21.3■■□□□ 1
SDHA-220ENST00000617470 GBP1P32455 592 aa21.3■■□□□ 1
SDHA-220ENST00000617470 ACADSBP45954 432 aa21.3■■□□□ 1
SDHA-220ENST00000617470 TWF1Q12792 350 aa21.3■■□□□ 1
SDHA-220ENST00000617470 TRIP13Q15645 432 aaPredicted RBP21.3■■□□□ 1
SDHA-220ENST00000617470 FAM172AQ8WUF8 416 aa21.3■■□□□ 1
SDHA-220ENST00000617470 C8orf48Q96LL4 319 aa21.3■■□□□ 1
SDHA-220ENST00000617470 CCDC114Q96M63 670 aa21.3■■□□□ 1
SDHA-220ENST00000617470 CDCA3Q99618 268 aaPredicted RBP21.3■■□□□ 1
SDHA-220ENST00000617470 HSFX1Q9UBD0 423 aa21.3■■□□□ 1
SDHA-220ENST00000617470 FEZ2Q9UHY8 353 aaPredicted RBP21.3■■□□□ 1
SDHA-220ENST00000617470 NFS1Q9Y697 457 aa21.3■■□□□ 1
SDHA-220ENST00000617470 SZT2Q5T011 3432 aa21.3■■□□□ 1
SDHA-220ENST00000617470 LRG1P02750 347 aa21.3■■□□□ 1
SDHA-220ENST00000617470 ATF6P18850 670 aa21.3■■□□□ 1
SDHA-220ENST00000617470 HYAL1Q12794 435 aa21.3■■□□□ 1
SDHA-220ENST00000617470 OASLQ15646 514 aaKnown RBP21.3■■□□□ 1
SDHA-220ENST00000617470 BBS12Q6ZW61 710 aa21.3■■□□□ 1
SDHA-220ENST00000617470 ARCQ7LC44 396 aa21.3■■□□□ 1
SDHA-220ENST00000617470 PRUNE1Q86TP1 453 aa21.3■■□□□ 1
SDHA-220ENST00000617470 KCTD6Q8NC69 237 aa21.3■■□□□ 1
SDHA-220ENST00000617470 NDRG1Q92597 394 aaKnown RBP21.3■■□□□ 1
SDHA-220ENST00000617470 HAUS1Q96CS2 278 aa21.3■■□□□ 1
SDHA-220ENST00000617470 WHRNQ9P202 907 aa21.3■■□□□ 1
SDHA-220ENST00000617470 VPS18Q9P253 973 aa21.3■■□□□ 1
SDHA-220ENST00000617470 SAE1Q9UBE0 346 aaPredicted RBP21.3■■□□□ 1
SDHA-220ENST00000617470 PTPRDP23468 1912 aa21.29■■□□□ 1
SDHA-220ENST00000617470 GAS8O95995 478 aa21.29■■□□□ 1
SDHA-220ENST00000617470 SDC4P31431 198 aa21.29■■□□□ 1
SDHA-220ENST00000617470 HDAC4P56524 1084 aa21.29■■□□□ 1
SDHA-220ENST00000617470 BYSLQ13895 437 aaKnown RBP21.29■■□□□ 1
SDHA-220ENST00000617470 PPM1LQ5SGD2 360 aa21.29■■□□□ 1
SDHA-220ENST00000617470 RHBDF2Q6PJF5 856 aa21.29■■□□□ 1
SDHA-220ENST00000617470 ELMSAN1Q6PJG2 1045 aa21.29■■□□□ 1
SDHA-220ENST00000617470 GPRIN1Q7Z2K8 1008 aa21.29■■□□□ 1
SDHA-220ENST00000617470 DEFB123Q8N688 67 aa21.29■■□□□ 1
SDHA-220ENST00000617470 GLIS1Q8NBF1 620 aa21.29■■□□□ 1
SDHA-220ENST00000617470 CENPIQ92674 756 aaPredicted RBP21.29■■□□□ 1
SDHA-220ENST00000617470 EPB41L4BQ9H329 900 aa21.29■■□□□ 1
SDHA-220ENST00000617470 LRRC4Q9HBW1 653 aa21.29■■□□□ 1
SDHA-220ENST00000617470 DPP7Q9UHL4 492 aa21.29■■□□□ 1
SDHA-220ENST00000617470 PLAAQ9Y263 795 aa21.29■■□□□ 1
SDHA-220ENST00000617470 CST8O60676 142 aa21.28■■□□□ 1
SDHA-220ENST00000617470 PTPN9P43378 593 aa21.28■■□□□ 1
SDHA-220ENST00000617470 EPHB3P54753 998 aa21.28■■□□□ 1
SDHA-220ENST00000617470 GABPB1Q06547 395 aaPredicted RBP21.28■■□□□ 1
SDHA-220ENST00000617470 ADIGQ0VDE8 80 aa21.28■■□□□ 1
SDHA-220ENST00000617470 TAF12Q16514 161 aa21.28■■□□□ 1
SDHA-220ENST00000617470 SLC35B2Q8TB61 432 aa21.28■■□□□ 1
SDHA-220ENST00000617470 MYLIPQ8WY64 445 aa21.28■■□□□ 1
SDHA-220ENST00000617470 KCTD13Q8WZ19 329 aa21.28■■□□□ 1
SDHA-220ENST00000617470 NKD2Q969F2 451 aaPredicted RBP21.28■■□□□ 1
SDHA-220ENST00000617470 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.28■■□□□ 1
SDHA-220ENST00000617470 ASIC3Q9UHC3 531 aa21.28■■□□□ 1
SDHA-220ENST00000617470 MAGED2Q9UNF1 606 aaPredicted RBP21.28■■□□□ 1
SDHA-220ENST00000617470 PRRC2BQ5JSZ5 2229 aaKnown RBP21.28■■□□□ 1
SDHA-220ENST00000617470 PRPSAP2O60256 369 aa21.28■■□□□ 1
SDHA-220ENST00000617470 RFPL2O75678 378 aa21.28■■□□□ 1
SDHA-220ENST00000617470 KRT14P02533 472 aa21.28■■□□□ 1
SDHA-220ENST00000617470 SLC5A3P53794 718 aa21.28■■□□□ 1
SDHA-220ENST00000617470 DYNLT1P63172 113 aa21.28■■□□□ 1
SDHA-220ENST00000617470 MMRN1Q13201 1228 aa21.28■■□□□ 1
SDHA-220ENST00000617470 VEPH1Q14D04 833 aa21.28■■□□□ 1
SDHA-220ENST00000617470 EP400NLQ6ZTU2 488 aa21.28■■□□□ 1
SDHA-220ENST00000617470 SIX6OS1Q8N1H7 587 aa21.28■■□□□ 1
SDHA-220ENST00000617470 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
SDHA-220ENST00000617470 ARL8AQ96BM9 186 aa21.28■■□□□ 1
SDHA-220ENST00000617470 ATP8A1Q9Y2Q0 1164 aa21.28■■□□□ 1
SDHA-220ENST00000617470 HHLA1C9JL84 531 aa21.27■■□□□ 1
SDHA-220ENST00000617470 C1RP00736 705 aa21.27■■□□□ 1
SDHA-220ENST00000617470 VCPP55072 806 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms