RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PREBQ9HCU5 417 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 KCNMB3Q9NPA1 279 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 GJB4Q9NTQ9 266 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PDRG1Q9NUG6 133 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 UCKL1Q9NWZ5 548 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PISDQ9UG56 409 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PRAMEF33A0A0G2JMD5 474 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 FAM221AA4D161 298 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 FAM47DPA6NHR8 397 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 GRID2O43424 1007 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 PRAMEF10O60809 474 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 EDN1P05305 212 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 SNRPB2P08579 225 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 GIMD1P0DJR0 217 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 GCFC2P16383 781 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 DGKAP23743 735 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 ITGA3P26006 1051 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 CSTF2P33240 577 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 AARSP49588 968 aaKnown RBP eCLIP9.37□□□□□ -0.913e-6■□□□□ 9.5
SMARCA4-218ENST00000592158 ART1P52961 327 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 OSTNP61366 133 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 SLC7A9P82251 487 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 EIF3IQ13347 325 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 CTTNQ14247 550 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 SLC45A4Q5BKX6 768 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 PPP4R3AQ6IN85 833 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 OTUD6AQ7L8S5 288 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 DSG4Q86SJ6 1040 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 HAS1Q92839 578 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 CCDC94Q9BW85 323 aaPredicted RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 EPB41L5Q9HCM4 733 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 SPHK2Q9NRA0 654 aa9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-218ENST00000592158 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CPED1A4D0V7 1026 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ZNF891A8MT65 544 aaPredicted RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ZBTB39O15060 712 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CASC3O15234 703 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CDKL5O76039 1030 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 JMJD7P0C870 316 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ALPPL2P10696 532 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 XBP1P17861 261 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 LIG1P18858 919 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CAPN3P20807 821 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 RNASE9P60153 205 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ENPP2Q13822 863 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 EPHA7Q15375 998 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 DDR2Q16832 855 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ZRANB3Q5FWF4 1079 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 TPH2Q8IWU9 490 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 C4orf19Q8IY42 314 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CCDC13Q8IYE1 715 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 FAM177A1Q8N128 213 aaPredicted RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 OTUB2Q96DC9 234 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 XPO6Q96QU8 1125 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 TM6SF1Q9BZW5 370 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 RNF38Q9H0F5 515 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 SGK2Q9HBY8 427 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 FOXJ2Q9P0K8 574 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 TUBGCP4Q9UGJ1 667 aa9.36□□□□□ -0.91
SMARCA4-218ENST00000592158 CUBNO60494 3623 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 ACKR2O00590 384 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 NKX2-8O15522 239 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 BAG4O95429 457 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 PRKAR1AP10644 381 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 LIFP15018 202 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 PFKLP17858 780 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 GRM5P41594 1212 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 HARS2P49590 506 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 SMARCB1Q12824 385 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 ZNF177Q13360 481 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 ZRSR2Q15696 482 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 INPP5JQ15735 1006 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 CDKN3Q16667 212 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 DEFB109BQ30KR1 87 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 PRR30Q53SZ7 412 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 EARS2Q5JPH6 523 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 NUGGCQ68CJ6 796 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 CDCA2Q69YH5 1023 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 GUSBP11Q6P575 273 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 OR2T3Q8NH03 318 aa9.35□□□□□ -0.91
SMARCA4-218ENST00000592158 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms