RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ATL3Q6DD88 541 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 RINT1Q6NUQ1 792 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 VSTM1Q6UX27 236 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 TPGS1Q6ZTW0 290 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 C1orf186Q6ZWK4 172 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 KCNK18Q7Z418 384 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 CD302Q8IX05 232 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 FOXD4L4Q8WXT5 416 aaPredicted RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 BHMTQ93088 406 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 FAM84AQ96KN4 292 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 CEP295NLQ96MC4 621 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 SLC46A1Q96NT5 459 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 CCNL2Q96S94 520 aaPredicted RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 CCSER2Q9H7U1 834 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 C17orf75Q9HAS0 396 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 DDX19AQ9NUU7 478 aaKnown RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 CFAP45Q9UL16 551 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ATXN7L1Q9ULK2 861 aaPredicted RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 SH3BP1Q9Y3L3 701 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 C2CD2Q9Y426 696 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 PTPRJQ12913 1337 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 MTORP42345 2549 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 RP1P56715 2156 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 LY6G6EA0A0G2JKS1 128 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 A0A1B0GVM2 712 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 A0A1W2PPC4 97 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 TISP43B9A030 160 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 F8VP50 259 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 YKT6O15498 198 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SIGLEC6O43699 453 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 NOBOXO60393 691 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 PPFIA2O75334 1257 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 PIGRP01833 764 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 RNF224P0DH78 156 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 PLS3P13797 630 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 LMO2P25791 158 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 CCT6AP40227 531 aaKnown RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 AFMP43652 599 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 RXRGP48443 463 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 ACOT2P49753 483 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 PGFP49763 221 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 BCAT1P54687 386 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 MFAP3P55082 362 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 NXPH1P58417 271 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 ASIC1P78348 528 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 E2F1Q01094 437 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 ORC2Q13416 577 aaPredicted RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 CAMK2GQ13555 558 aaPredicted RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 KCNJ12Q14500 433 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 TBR1Q16650 682 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 KYAT1Q16773 422 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SOWAHAQ2M3V2 549 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 TMEM215Q68D42 235 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 KIAA0895LQ68EN5 471 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 ZNF787Q6DD87 383 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 HTR3DQ70Z44 454 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 CLEC14AQ86T13 490 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SPATS2Q86XZ4 545 aaKnown RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 PTRH1Q86Y79 214 aaKnown RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 TICAM1Q8IUC6 712 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 KBTBD7Q8WVZ9 684 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SORCS1Q8WY21 1168 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 KCNN1Q92952 543 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 DEPDC7Q96QD5 511 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 XPO6Q96QU8 1125 aaKnown RBP6.44□□□□□ -1.38
VPS25-204ENST00000589577 ARHGAP9Q9BRR9 750 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 FUCA2Q9BTY2 467 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 RAB34Q9BZG1 259 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SLC25A18Q9H1K4 315 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 LHX5Q9H2C1 402 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 CAAP1Q9H8G2 361 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 PLK2Q9NYY3 685 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 MTMR6Q9Y217 621 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 SLC27A6Q9Y2P4 619 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 NME7Q9Y5B8 376 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 U3KQA8 63 aa6.44□□□□□ -1.38
VPS25-204ENST00000589577 HNRNPDLO14979 420 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 NPC1O15118 1278 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SYNCRIPO60506 623 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 SDC3O75056 442 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 EPHX1P07099 455 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 GIMD1P0DJR0 217 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 WT1P19544 449 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 PTMSP20962 102 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 GUCY2CP25092 1073 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ELAVL4P26378 380 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 TNFRSF8P28908 595 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 MCM7P33993 719 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 CASRP41180 1078 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ARRB1P49407 418 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 LIG4P49917 911 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 NCKAP1LP55160 1127 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 CDH8P55286 799 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 RPS14P62263 151 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 RAD51AP2Q09MP3 1159 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 STK38Q15208 465 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms