RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF202O95125 648 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 PENKP01210 267 aaPredicted RBP14.36□□□□□ -0.11
HDAC5-208ENST00000588419 SYPP08247 313 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 CD19P15391 556 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 GNSP15586 552 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 CD6P30203 668 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 RAD23BP54727 409 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 LRMPQ12912 555 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 PNOCQ13519 176 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 ZCCHC9Q8N567 271 aaKnown RBP14.36□□□□□ -0.11
HDAC5-208ENST00000588419 SORCS1Q8WY21 1168 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 ZCCHC14Q8WYQ9 949 aaKnown RBP14.36□□□□□ -0.11
HDAC5-208ENST00000588419 SNX19Q92543 992 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 TATDN2Q93075 761 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 TOE1Q96GM8 510 aaKnown RBP14.36□□□□□ -0.11
HDAC5-208ENST00000588419 GPR174Q9BXC1 333 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 LRRC4Q9HBW1 653 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 CD248Q9HCU0 757 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 KLK13Q9UKR3 277 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 USP3Q9Y6I4 520 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 A0A1W2PQD8 194 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 TULP2O00295 520 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 GFRA2O00451 464 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 EPHX1P07099 455 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 ACADMP11310 421 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 NCAM1P13591 858 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 GTF2H1P32780 548 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 FAM193AP78312 1265 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 ADIGQ0VDE8 80 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 ZNF234Q14588 700 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 EDRF1Q3B7T1 1238 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CBWD6Q4V339 395 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 ZCWPW2Q504Y3 356 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CBWD3Q5JTY5 395 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 WDR45BQ5MNZ6 344 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CBWD5Q5RIA9 395 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 FAM124AQ86V42 546 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 EDEM1Q92611 657 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
HDAC5-208ENST00000588419 FOXJ1Q92949 421 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CCDC34Q96HJ3 373 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 IPO9Q96P70 1041 aaKnown RBP14.35□□□□□ -0.11
HDAC5-208ENST00000588419 TSG101Q99816 390 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 SCAND2PQ9GZW5 306 aaPredicted RBP14.35□□□□□ -0.11
HDAC5-208ENST00000588419 THAP10Q9P2Z0 257 aaPredicted RBP14.35□□□□□ -0.11
HDAC5-208ENST00000588419 HESX1Q9UBX0 185 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 SUSD2Q9UGT4 822 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 TSPAN16Q9UKR8 245 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 CLEC4EQ9ULY5 219 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 FRYQ5TBA9 3013 aa14.35□□□□□ -0.11
HDAC5-208ENST00000588419 PLXNA2O75051 1894 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 FAM237AA0A1B0GTK4 181 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PIK3R2O00459 728 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 ZBED1O96006 694 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 HLA-EP13747 358 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 LCP1P13796 627 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PRKCHP24723 683 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 BCAT1P54687 386 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PDE4CQ08493 712 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 GRIK2Q13002 908 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 DCAF12L1Q5VU92 463 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SERPINA13PQ6UXR4 307 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PIP4P1Q86T03 277 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 TMPRSS6Q8IU80 811 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 FMNL3Q8IVF7 1028 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SIX6OS1Q8N1H7 587 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 ZNF366Q8N895 744 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 UBA3Q8TBC4 463 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PLD4Q96BZ4 506 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 MKRN2Q9H000 416 aaKnown RBP14.34□□□□□ -0.11
HDAC5-208ENST00000588419 FAM124BQ9H5Z6 455 aaPredicted RBP14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SFMBT1Q9UHJ3 866 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 WASF3Q9UPY6 502 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 SLC27A6Q9Y2P4 619 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PCDHB9Q9Y5E1 797 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 PTPRBP23467 1997 aa14.34□□□□□ -0.11
HDAC5-208ENST00000588419 A0A1W2PQ27 194 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 A0A1W2PQ64 194 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 TRIM49BA6NDI0 452 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 KCNJ18B7U540 433 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 XPO1O14980 1071 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 MSI1O43347 362 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 SH3BP5O60239 455 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 RDXP35241 583 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 PRCPP42785 496 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 HARS2P49590 506 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 ENPEPQ07075 957 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 BST2Q10589 180 aaKnown RBP14.33□□□□□ -0.12
HDAC5-208ENST00000588419 CUL2Q13617 745 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 RAB41Q5JT25 222 aa14.33□□□□□ -0.12
HDAC5-208ENST00000588419 CHCHD4Q8N4Q1 142 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms