RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SLC27A6Q9Y2P4 619 aa4.07□□□□□ -1.76
SMCHD1-206ENST00000581631 CLEC18AA5D8T8 446 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 PRSS47A8MTI9 375 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ACOT8O14734 319 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 U2AF1L5P0DN76 240 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ST6GAL1P15907 406 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ACVR2AP27037 513 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 SLC7A1P30825 629 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 SOX2P48431 317 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ITGA8P53708 1063 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 U2AF1Q01081 240 aaKnown RBP eCLIP4.06□□□□□ -1.763e-6■■■□□ 16.5
SMCHD1-206ENST00000581631 LTBQ06643 244 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 CCDC15Q0P6D6 951 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 PTGR1Q14914 329 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 MINDY4Q4G0A6 757 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 GFI1BQ5VTD9 330 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 MAEAQ7L5Y9 396 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 TCEAL8Q8IYN2 117 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ANKRD13AQ8IZ07 590 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 TMEM199Q8N511 208 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 MAGEB6Q8N7X4 407 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 FAM71DQ8N9W8 422 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 CLEC18CQ8NCF0 446 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 NUDCD2Q8WVJ2 157 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 PIGKQ92643 395 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 NEUROG1Q92886 237 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 ATP2A3Q93084 1043 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 SUCLG2Q96I99 432 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 THSD1Q9NS62 852 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 TCEAL9Q9UHQ7 104 aa4.06□□□□□ -1.76
SMCHD1-206ENST00000581631 CAPN8A6NHC0 703 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 NTN3O00634 580 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 USP12O75317 370 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 TMIGD3P0DMS9 266 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 TFEBP19484 476 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 CDC25AP30304 524 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 CPT1AP50416 773 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 RAE1P78406 368 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 MTA1Q13330 715 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 ARHGAP29Q52LW3 1261 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 NXNQ6DKJ4 435 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 TMPRSS12Q86WS5 348 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 MED30Q96HR3 178 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 VPS50Q96JG6 964 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 PIMREGQ9BSJ6 248 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 CINPQ9BW66 212 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 FAM83DQ9H4H8 585 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 CPNE7Q9UBL6 633 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 DDX20Q9UHI6 824 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 CAPN11Q9UMQ6 739 aa4.05□□□□□ -1.76
SMCHD1-206ENST00000581631 DOCK7Q96N67 2140 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 KIR2DS5A0A0G2JLQ3 304 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 CFAP69A5D8W1 941 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 A6NNZ2 444 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 KIR2DS3K7RE56 304 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 PODXLO00592 558 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 PRYO14603 147 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 TNFRSF13BO14836 293 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 TSPAN6O43657 245 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 TXNP10599 105 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 RBL1P28749 1068 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 SUMO3P55854 103 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 CNN3Q15417 329 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 SMTNL2Q2TAL5 461 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 ATG9BQ674R7 924 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 KIAA0319LQ8IZA0 1049 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 OIT3Q8WWZ8 545 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 TSR2Q969E8 191 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 NTPCRQ9BSD7 190 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 TMEM60Q9H2L4 133 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 FZD3Q9NPG1 666 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 C1orf112Q9NSG2 853 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 DNAJB11Q9UBS4 358 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 MID2Q9UJV3 735 aa4.04□□□□□ -1.76
SMCHD1-206ENST00000581631 AQP7P3A6NL99 342 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 RASSF9O75901 435 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 PLGP00747 810 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 EGR4Q05215 589 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 STK3Q13188 491 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 GAB1Q13480 694 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 NFATC4Q14934 902 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 PIK3CD-AS1Q5SR53 167 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 MANEALQ5VSG8 457 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 APOA5Q6Q788 366 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 ZNF329Q86UD4 541 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 MYO1HQ8N1T3 1032 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 RNF26Q9BY78 433 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 RBM38Q9H0Z9 239 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 CHST8Q9H2A9 424 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 ABHD10Q9NUJ1 306 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 COL20A1Q9P218 1284 aa4.03□□□□□ -1.76
SMCHD1-206ENST00000581631 ZNF335Q9H4Z2 1342 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 A6NNC1 897 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 VSTM5A8MXK1 200 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms