RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 LHX5Q9H2C1 402 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 PANK4Q9NVE7 773 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 OSER1Q9NX31 292 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 ELOVL2Q9NXB9 296 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 HSPBP1Q9NZL4 362 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 CCDC39Q9UFE4 941 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
BRIP1-204ENST00000579028 TP53BP1Q12888 1972 aaPredicted RBP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 H3BQV1 296 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 TSPAN3O60637 253 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 RFPL3O75679 317 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 BEST1O76090 585 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 KLKB1P03952 638 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 DLATP10515 647 aaKnown RBP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 CD27P26842 260 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 CHKAP35790 457 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 CLDN6P56747 220 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 TLE3Q04726 772 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 NUMA1Q14980 2115 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 PSMD6Q15008 389 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 SNRNP35Q16560 246 aaKnown RBP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 RRAGBQ5VZM2 374 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 FBXL19Q6PCT2 694 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 LAYNQ6UX15 382 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 ANKS1BQ7Z6G8 1248 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 CACUL1Q86Y37 369 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 SPNS2Q8IVW8 549 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 ZNF276Q8N554 614 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 ZNF516Q92618 1163 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 FGF11Q92914 225 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 BIRC7Q96CA5 298 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 WBP1Q96G27 269 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 ORAI3Q9BRQ5 295 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 SMYD3Q9H7B4 428 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 NMUR1Q9HB89 426 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
BRIP1-204ENST00000579028 DNMT3LQ9UJW3 386 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 SCML2Q9UQR0 700 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 ZNF510Q9Y2H8 683 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 AK5Q9Y6K8 562 aa9.15□□□□□ -0.94
BRIP1-204ENST00000579028 MYLKQ15746 1914 aa9.15□□□□□ -0.95
BRIP1-204ENST00000579028 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
BRIP1-204ENST00000579028 HHLA1C9JL84 531 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 MDM4O15151 490 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 VILLO15195 856 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 CYP26A1O43174 497 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TIMM44O43615 452 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 LDOC1O95751 146 aaPredicted RBP9.14□□□□□ -0.95
BRIP1-204ENST00000579028 SEMA4FO95754 770 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 EPHX1P07099 455 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 RARGP13631 454 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 CCDC130P13994 396 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 HOXD13P35453 343 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 ACADVLP49748 655 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 IL9RQ01113 521 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 CYP24A1Q07973 514 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TARDBPQ13148 414 aaKnown RBP eCLIP9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TRPC3Q13507 836 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 HES3Q5TGS1 186 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TMEM215Q68D42 235 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 SERPINA13PQ6UXR4 307 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 GPRIN1Q7Z2K8 1008 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 ACOT1Q86TX2 421 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 GATAD2AQ86YP4 633 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 SPACA3Q8IXA5 215 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 CACTIN-AS1Q8N1I8 211 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TSC1Q92574 1164 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 CNDP2Q96KP4 475 aaKnown RBP9.14□□□□□ -0.95
BRIP1-204ENST00000579028 SLC2A11Q9BYW1 496 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 BTBD1Q9H0C5 482 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
BRIP1-204ENST00000579028 SDCBP2Q9H190 292 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 FBRSQ9HAH7 460 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 KNTC1P50748 2209 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 BPTFQ12830 3046 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 PTPRQQ9UMZ3 2332 aa9.14□□□□□ -0.95
BRIP1-204ENST00000579028 PLXNA2O75051 1894 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
BRIP1-204ENST00000579028 A0A1W2PQH9 124 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 CBX4O00257 560 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 EIF3DO15371 548 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRIP1-204ENST00000579028 FSBPO95073 299 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 GJB2P29033 226 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 ACTN2P35609 894 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 BCAT1P54687 386 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 MAP3K7CLP57077 242 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 RACK1P63244 317 aaKnown RBP9.13□□□□□ -0.95
BRIP1-204ENST00000579028 CXADRP78310 365 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 RHDQ02161 417 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 ZBTB16Q05516 673 aa9.13□□□□□ -0.95
BRIP1-204ENST00000579028 DNAJC3Q13217 504 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms