RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CREB5Q02930 508 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 TFDP2Q14188 446 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 SLFN12LQ6IEE8 588 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 CROCCP3Q8IVE0 287 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 DEPDC1BQ8WUY9 529 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 HSPH1Q92598 858 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 FEM1BQ9UK73 627 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 DKC1O60832 514 aaKnown RBP eCLIP15.9■□□□□ 0.143e-6■■■■■ 27.9
SMG6-207ENST00000570756 ENTPD3O75355 529 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 CCNE2O96020 404 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 SLC5A2P31639 672 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 RPL10AP62906 217 aaKnown RBP15.9■□□□□ 0.14
SMG6-207ENST00000570756 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 ADGRE1Q14246 886 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 LPIN1Q14693 890 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 UNC5AQ6ZN44 842 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 RSPH3Q86UC2 560 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 WDTC1Q8N5D0 677 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 PCSK1NQ9UHG2 260 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 SH3GLB1Q9Y371 365 aa15.9■□□□□ 0.14
SMG6-207ENST00000570756 HMX2A2RU54 273 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 SLC15A5A6NIM6 579 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 CDH2P19022 906 aaPredicted RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 IYDQ6PHW0 289 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 CAND1Q86VP6 1230 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 ERI1Q8IV48 349 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 JOSD2Q8TAC2 188 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 MMP19Q99542 508 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 SGIP1Q9BQI5 828 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 TRIM56Q9BRZ2 755 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 HERC5Q9UII4 1024 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 FBXO21O94952 628 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 GSRP00390 522 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 ICAM1P05362 532 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 APRTP07741 180 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 PCSK6P29122 969 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 ACAP1Q15027 740 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 N4BP2L1Q5TBK1 243 aaPredicted RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 MAVSQ7Z434 540 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 FNDC8Q8TC99 324 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 ATP6V0A1Q93050 837 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMG6-207ENST00000570756 PLAC1Q9HBJ0 212 aa15.89■□□□□ 0.13
SMG6-207ENST00000570756 RSL24D1Q9UHA3 163 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
SMG6-207ENST00000570756 KCNN4O15554 427 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 DCXO43602 365 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 ASS1P00966 412 aaKnown RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 MAGEA6P43360 314 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 PSMC1P62191 440 aaKnown RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 YWHAEP62258 255 aaKnown RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 ZNF394Q53GI3 561 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 SH3D19Q5HYK7 790 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 DUS1LQ6P1R4 473 aaKnown RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 C16orf89Q6UX73 402 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 EFCAB3Q8N7B9 438 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 ZBTB8BQ8NAP8 495 aaPredicted RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 MCUQ8NE86 351 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 JDP2Q8WYK2 163 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 RTP4Q96DX8 246 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 MSTO1Q9BUK6 570 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 CISHQ9NSE2 258 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 DCDC2Q9UHG0 476 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 PCDHA10Q9Y5I2 948 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 CEPT1Q9Y6K0 416 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 ARID2Q68CP9 1835 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 KCNA4P22459 653 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 MIPP30301 263 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 AP3M2P53677 418 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 FLOT2Q14254 428 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 NPNTQ6UXI9 565 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 TRIM67Q6ZTA4 783 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 PODNQ7Z5L7 613 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 TICAM1Q8IUC6 712 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 OR5B17Q8NGF7 314 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 PNPOQ9NVS9 261 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 PAIP2BQ9ULR5 123 aaKnown RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 USP18Q9UMW8 372 aa15.88■□□□□ 0.13
SMG6-207ENST00000570756 FAF1Q9UNN5 650 aaPredicted RBP15.88■□□□□ 0.13
SMG6-207ENST00000570756 NFIBO00712 420 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PLIN3O60664 434 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 CCDC130P13994 396 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 CBX3Q13185 183 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PTPN20Q4JDL3 420 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 METTL21CQ5VZV1 264 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 KLHL35Q6PF15 583 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 ISLR2Q6UXK2 745 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 C4orf22Q6V702 233 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PHTF2Q8N3S3 785 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 DLG3Q92796 817 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 SORT1Q99523 831 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 EBNA1BP2Q99848 306 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms