RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TULP3O75386 442 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
LINC00564-201ENST00000567258 CYBBP04839 570 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 TYRP14679 529 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 TGM1P22735 817 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 HOXC13P31276 330 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 CHKAP35790 457 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 MPLP40238 635 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 BCAT1P54687 386 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 RAD23BP54727 409 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 LRMPQ12912 555 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 CUL2Q13617 745 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 E2F5Q15329 346 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 PLK5Q496M5 336 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 C12orf40Q86WS4 652 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 ELOA2Q8IYF1 753 aaPredicted RBP10.88□□□□□ -0.67
LINC00564-201ENST00000567258 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 TERB1Q8NA31 727 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 IL17RCQ8NAC3 791 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 ANKRD52Q8NB46 1076 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 SLC4A11Q8NBS3 891 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 HMGB4Q8WW32 186 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 NT5C1BQ96P26 610 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 LRRC4Q9HBW1 653 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
LINC00564-201ENST00000567258 CLIC5Q9NZA1 410 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 NUDT5Q9UKK9 219 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 KIAA1257Q9ULG3 409 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 INVSQ9Y283 1065 aa10.88□□□□□ -0.67
LINC00564-201ENST00000567258 TCRBV21S2A2A0A5A6 115 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 SLC30A4O14863 429 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 DCLK1O15075 740 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CAVIN2O95810 425 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 HMBSP08397 361 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 VDRP11473 427 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 FMO5P49326 533 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 DHPSP49366 369 aaPredicted RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 DGKGP49619 791 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 TKTL1P51854 596 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 MCCD1P59942 119 aaPredicted RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 YWHAGP61981 247 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 EFEMP1Q12805 493 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 SUZ12Q15022 739 aaKnown RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 SF3A2Q15428 464 aaKnown RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CCDC6Q16204 474 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 GOLGA7BQ2TAP0 167 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CBWD6Q4V339 395 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CBWD3Q5JTY5 395 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CBWD5Q5RIA9 395 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 EMC10Q5UCC4 262 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 ARHGAP17Q68EM7 881 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 LPCAT2Q7L5N7 544 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CYP2U1Q7Z449 544 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 PIGZQ86VD9 579 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 RASSF3Q86WH2 238 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 SIX6OS1Q8N1H7 587 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 PPM1KQ8N3J5 372 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 MDGA1Q8NFP4 955 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 SPATA20Q8TB22 786 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 RNF139Q8WU17 664 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 ARID3AQ99856 593 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 DUSP15Q9H1R2 295 aaPredicted RBP10.87□□□□□ -0.67
LINC00564-201ENST00000567258 NMUR1Q9HB89 426 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 MARCH2Q9P0N8 246 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 COQ4Q9Y3A0 265 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 USP3Q9Y6I4 520 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 LAMA1P25391 3075 aa10.87□□□□□ -0.67
LINC00564-201ENST00000567258 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 SGK1O00141 431 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 XPO1O14980 1071 aaKnown RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 MDM4O15151 490 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 CACNG3O60359 315 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 STC2O76061 302 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 GNA14O95837 355 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 ZBED1O96006 694 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 SETSIPP0DME0 302 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 HOXB2P14652 356 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 NTSR1P30989 418 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 DPP6P42658 865 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 KIR2DL1P43626 348 aaPredicted RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 PGFP49763 221 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 PMS1P54277 932 aaKnown RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 ARID5AQ03989 594 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 ETFBKMTQ8IXQ9 262 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 ZC3H3Q8IXZ2 948 aaKnown RBP10.86□□□□□ -0.67
LINC00564-201ENST00000567258 CHPFQ8IZ52 775 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 UCMAQ8WVF2 138 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 BHMTQ93088 406 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 SLC35C1Q96A29 364 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 TSPAN16Q9UKR8 245 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms