RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 A1CFQ9NQ94 594 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 TRMT13Q9NUP7 481 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 SNX14Q9Y5W7 946 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 RECQL4O94761 1208 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 RASAL1O95294 804 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 CFIP05156 583 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 PPP3CBP16298 524 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 MGAT1P26572 445 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 GABRB3P28472 473 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 HALP42357 657 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 SCAPQ12770 1279 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 RESTQ13127 1097 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 STARD3Q14849 445 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 NPY5RQ15761 445 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 KLHL40Q2TBA0 621 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 BEAN1Q3B7T3 259 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 LRIT3Q3SXY7 679 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 PREPLQ4J6C6 727 aaPredicted RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 RABL3Q5HYI8 236 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 DEPDC1Q5TB30 811 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 NAIF1Q69YI7 327 aaPredicted RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 TTLL10Q6ZVT0 673 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 SIAH1Q8IUQ4 282 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 MUL1Q969V5 352 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF566Q969W8 418 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 TTLL2Q9BWV7 592 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ALOXE3Q9BYJ1 711 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 SMPD4Q9NXE4 827 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ANKFY1Q9P2R3 1169 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF804BA4D1E1 1349 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 UBN2Q6ZU65 1347 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 PIP5K1BO14986 540 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 EPB41L2O43491 1005 aaKnown RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ASNA1O43681 348 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ARP10275 920 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 BTF3P20290 206 aaKnown RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 IL1R2P27930 398 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ATICP31939 592 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 POU6F2P78424 691 aaPredicted RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 CASC1Q6TDU7 716 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 MTERF4Q7Z6M4 381 aaKnown RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 DPP9Q86TI2 863 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 TBC1D16Q8TBP0 767 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 CD99L2Q8TCZ2 262 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 BPIFB1Q8TDL5 484 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 HEPHQ9BQS7 1158 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 COA1Q9GZY4 146 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ARFGAP3Q9NP61 516 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 SLC39A10Q9ULF5 831 aa4.75□□□□□ -1.65
LINC00561-201ENST00000565815 POLR2AP24928 1970 aaKnown RBP4.75□□□□□ -1.65
LINC00561-201ENST00000565815 ACKR2O00590 384 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 FOXD2O60548 495 aaPredicted RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 KCNA2P16389 499 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 MCM2P49736 904 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 CTSWP56202 376 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RPS8P62241 208 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF844Q08AG5 666 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 IQCB1Q15051 598 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PUM3Q15397 648 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TIGD6Q17RP2 521 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TMTC4Q5T4D3 741 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 STRIP1Q5VSL9 837 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ANKRD35Q8N283 1001 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TMEM132CQ8N3T6 1108 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 VGLL2Q8N8G2 317 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ANKRD42Q8N9B4 389 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF527Q8NB42 609 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 MYCBPAPQ8TBZ2 947 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PNKPQ96T60 521 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 GDF15Q99988 308 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RNPEPQ9H4A4 650 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 UNKLQ9H9P5 680 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 LPAR3Q9UBY5 353 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TRMT112Q9UI30 125 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RRP7AQ9Y3A4 280 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RAD54BQ9Y620 910 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 LAMB2P55268 1798 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RTL9Q8NET4 1388 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 HOXB7P09629 217 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 KLRC1P26715 233 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ALDH9A1P49189 494 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 NDUFV1P49821 464 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TCF15Q12870 199 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 FHL3Q13643 280 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TNFAIP1Q13829 316 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PFKFB4Q16877 469 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 JMJD6Q6NYC1 403 aaPredicted RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TMEM57Q8N5G2 664 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ACRBPQ8NEB7 543 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ASB10Q8WXI3 467 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 SUCLG2Q96I99 432 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PLEKHG4BQ96PX9 1271 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 DBNDD1Q9H9R9 158 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 GOLGA2P5Q9HBQ8 144 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms