RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SEMA3AQ14563 771 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 CNGA3Q16281 694 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 GFOD2Q3B7J2 385 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 MANEAQ5SRI9 462 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 UEVLDQ8IX04 471 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 MYO1HQ8N1T3 1032 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 SUN3Q8TAQ9 357 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 ABHD5Q8WTS1 349 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 PIGKQ92643 395 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 TM2D2Q9BX73 214 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 NUP62CLQ9H1M0 184 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 ZBTB26Q9HCK0 441 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 SEMA4BQ9NPR2 832 aaPredicted RBP5.04□□□□□ -1.6
CHD9-212ENST00000564641 POLA1P09884 1462 aaPredicted RBP5.04□□□□□ -1.6
CHD9-212ENST00000564641 CHD1O14646 1710 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 C2CD4BA6NLJ0 364 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 F8W810 466 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 SLC3A2P08195 630 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 MATN1P21941 496 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 RPS6KB1P23443 525 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 ALDH7A1P49419 539 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 KCNJ12Q14500 433 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 GRHL2Q6ISB3 625 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 MEPCEQ7L2J0 689 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 KRT28Q7Z3Y7 464 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 RAVER1Q8IY67 606 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 NLRP4Q96MN2 994 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 PAPOLBQ9NRJ5 636 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 TMOD4Q9NZQ9 345 aa5.03□□□□□ -1.6
CHD9-212ENST00000564641 TARBP1Q13395 1621 aaKnown RBP5.03□□□□□ -1.6
CHD9-212ENST00000564641 ZNF335Q9H4Z2 1342 aaPredicted RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 SYNJ2O15056 1496 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 AQRO60306 1485 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHD9-212ENST00000564641 GRIN2BQ13224 1484 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 RRHO14718 337 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 CCNT2O60583 730 aaKnown RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 TFEBP19484 476 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 MMP8P22894 467 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 TBXAS1P24557 533 aaPredicted RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 MTAPQ13126 283 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 ERV3-1Q14264 604 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 GLE1Q53GS7 698 aaKnown RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 RBM44Q6ZP01 1051 aaKnown RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 ADAMTS15Q8TE58 950 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 IGFBPL1Q8WX77 278 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 PMM1Q92871 262 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 IQCDQ96DY2 449 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 TRMT61AQ96FX7 289 aaKnown RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 SENP7Q9BQF6 1050 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 TMEM8AQ9HCN3 771 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 PNPLA8Q9NP80 782 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 DECR2Q9NUI1 292 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 TBC1D23Q9NUY8 699 aa5.02□□□□□ -1.61
CHD9-212ENST00000564641 HEMK1Q9Y5R4 338 aaPredicted RBP5.02□□□□□ -1.61
CHD9-212ENST00000564641 FRMPD2Q68DX3 1309 aaPredicted RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 CCDC187A0A096LP49 1063 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 PRPF4O43172 522 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHD9-212ENST00000564641 TSPAN6O43657 245 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 TLX3O43711 291 aaPredicted RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 SYF2O95926 243 aaKnown RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 T-ENOLP0DO92 83 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 RHCEP18577 417 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 HOXA7P31268 230 aaPredicted RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 HTR6P50406 440 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 RAE1P78406 368 aaKnown RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 RHDQ02161 417 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 TLDC1Q6P9B6 456 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 USP17L6PQ6QN14 398 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 KRT78Q8N1N4 520 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 SLC44A5Q8NCS7 719 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 WIPF2Q8TF74 440 aaPredicted RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 JDP2Q8WYK2 163 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 PHKBQ93100 1093 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 THOC3Q96J01 351 aaKnown RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 WDR24Q96S15 920 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 AGO4Q9HCK5 861 aaKnown RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 ZBTB40Q9NUA8 1239 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 DDX20Q9UHI6 824 aaKnown RBP5.01□□□□□ -1.61
CHD9-212ENST00000564641 CACNA1IQ9P0X4 2223 aa5.01□□□□□ -1.61
CHD9-212ENST00000564641 SPATA31A5Q5VU36 1347 aa5□□□□□ -1.61
CHD9-212ENST00000564641 SPATA31A7Q8IWB4 1347 aa5□□□□□ -1.61
CHD9-212ENST00000564641 CLCA1A8K7I4 914 aa5□□□□□ -1.61
CHD9-212ENST00000564641 VSTM5A8MXK1 200 aa5□□□□□ -1.61
CHD9-212ENST00000564641 AREL1O15033 823 aa5□□□□□ -1.61
CHD9-212ENST00000564641 SMAD6O43541 496 aaKnown RBP5□□□□□ -1.61
CHD9-212ENST00000564641 COQ9O75208 318 aa5□□□□□ -1.61
CHD9-212ENST00000564641 IL18RAPO95256 599 aa5□□□□□ -1.61
CHD9-212ENST00000564641 HOXD12P35452 270 aa5□□□□□ -1.61
CHD9-212ENST00000564641 NANOS2P60321 138 aaKnown RBP5□□□□□ -1.61
CHD9-212ENST00000564641 MTA1Q13330 715 aa5□□□□□ -1.61
CHD9-212ENST00000564641 GRM3Q14832 879 aa5□□□□□ -1.61
CHD9-212ENST00000564641 OVCA2Q8WZ82 227 aa5□□□□□ -1.61
CHD9-212ENST00000564641 KAT2BQ92831 832 aa5□□□□□ -1.61
CHD9-212ENST00000564641 ERVK-5Q9HDB9 667 aa5□□□□□ -1.61
CHD9-212ENST00000564641 ABHD10Q9NUJ1 306 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms