RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NNTQ13423 1086 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 CTC1Q2NKJ3 1217 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 C10orf120Q5SQS8 335 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 DAB2IPQ5VWQ8 1189 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 TMC5Q6UXY8 1006 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPG7-209ENST00000564047 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 GRASPQ7Z6J2 395 aaPredicted RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 GPR149Q86SP6 731 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 C12orf76Q8N812 135 aaPredicted RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 ADAM32Q8TC27 787 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 ATXN3LQ9H3M9 355 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 WDR6Q9NNW5 1121 aaKnown RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPG7-209ENST00000564047 CALCOCO1Q9P1Z2 691 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 DNMT3LQ9UJW3 386 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 NUDT5Q9UKK9 219 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPG7-209ENST00000564047 PCDHA3Q9Y5H8 950 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 ENC1O14682 589 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 FANCGO15287 622 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 COCHO43405 550 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 PRPSAP2O60256 369 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 TBX18O95935 607 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 ATP1A1P05023 1023 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 KRT7P08729 469 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 DDX6P26196 483 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPG7-209ENST00000564047 CCR2P41597 374 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 CXCR3P49682 368 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 ATXN1P54253 815 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 AIF1P55008 147 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 EFEMP1Q12805 493 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 TRIP4Q15650 581 aaPredicted RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 BOLA3Q53S33 107 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 PRSS36Q5K4E3 855 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 RARS2Q5T160 578 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 PAPD7Q5XG87 772 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 UBL4BQ8N7F7 174 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 SHKBP1Q8TBC3 707 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 NACA2Q9H009 215 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.42□□□□□ -0.267e-7■■■□□ 14.8
SPG7-209ENST00000564047 DDX56Q9NY93 547 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 PCSK1NQ9UHG2 260 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 ZMYM5Q9UJ78 669 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 RASAL2Q9UJF2 1139 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 TLR6Q9Y2C9 796 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 HBS1LQ9Y450 684 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
SPG7-209ENST00000564047 SPTBN4Q9H254 2564 aa13.42□□□□□ -0.26
SPG7-209ENST00000564047 CLUHO75153 1309 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 MYO15AQ9UKN7 3530 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 C2orf78A6NCI8 922 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 MDM4O15151 490 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 MOSPD3O75425 235 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 SLC2A3P11169 496 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 TCF4P15884 667 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PRLRP16471 622 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 IL1R2P27930 398 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 CCR1P32246 355 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PEX5P50542 639 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 RWDD2BP57060 319 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 TBX4P57082 545 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 NTHL1P78549 312 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 COG7P83436 770 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 CYP4F8P98187 520 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 ITIH3Q06033 890 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 RING1Q06587 406 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PPP2R5DQ14738 602 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 BRMS1LQ5PSV4 323 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 CYP4V2Q6ZWL3 525 aaPredicted RBP13.41□□□□□ -0.26
SPG7-209ENST00000564047 FAM131BQ86XD5 332 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
SPG7-209ENST00000564047 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 TSC1Q92574 1164 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 KRT35Q92764 455 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
SPG7-209ENST00000564047 SLC39A13Q96H72 371 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 PEBP4Q96S96 227 aa13.41□□□□□ -0.26
SPG7-209ENST00000564047 RNF38Q9H0F5 515 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms