RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ANO9A1A5B4 782 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 C2CD4BA6NLJ0 364 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 INPPL1O15357 1258 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 CCNT2O60583 730 aaKnown RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 FGF18O76093 207 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 PLAUP00749 431 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 FGF2P09038 288 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 HARSP12081 509 aaKnown RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 PECAM1P16284 738 aaPredicted RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 EGR1P18146 543 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 DRD1P21728 446 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 HOXD12P35452 270 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 GNALP38405 381 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ZNF84P51523 738 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 FOXG1P55316 489 aaPredicted RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 LINC00205P59089 165 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 RPS13P62277 151 aaKnown RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 ID2Q02363 134 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 MAPK7Q13164 816 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 IFIT5Q13325 482 aaKnown RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 STIM1Q13586 685 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 PMS2P11Q13670 270 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 TWIST1Q15672 202 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 MAPKAPK3Q16644 382 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 FAM110CQ1W6H9 321 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ARL13BQ3SXY8 428 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 LEXMQ3ZCV2 418 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 SLC9C1Q4G0N8 1177 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ARHGAP15Q53QZ3 475 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ANO7Q6IWH7 933 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ACSM6Q6P461 480 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 TLDC1Q6P9B6 456 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 KYAT3Q6YP21 454 aaKnown RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 DPP9Q86TI2 863 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 RFX6Q8HWS3 928 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 GJA10Q969M2 543 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 ZFYVE19Q96K21 471 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 FCRL5Q96RD9 977 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 KRTAP1-5Q9BYS1 174 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 PI4KBQ9UBF8 816 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 VPS4AQ9UN37 437 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 PCDHB2Q9Y5E7 798 aa2.73□□□□□ -1.97
CHD9-204ENST00000561869 SIRT4Q9Y6E7 314 aaPredicted RBP2.73□□□□□ -1.97
CHD9-204ENST00000561869 TTBK1Q5TCY1 1321 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 SLC22A23A1A5C7 686 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 FAM234BA2RU67 622 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 ZSCAN9O15535 394 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 CTIFO43310 598 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 MYL3P08590 195 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 TMEM191BP0C7N4 346 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 ALADP13716 330 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 TNFRSF1BP20333 461 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 RPS6KB1P23443 525 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 TNFSF4P23510 183 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 TACR3P29371 465 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 IGHMBP2P38935 993 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 SOX2P48431 317 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 SEMA3BQ13214 749 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 HLTFQ14527 1009 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-204ENST00000561869 CNGA3Q16281 694 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 SLC35G1Q2M3R5 365 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 ZNF260Q3ZCT1 412 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 FAM209BQ5JX69 171 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 CCDC144NLQ6NUI1 221 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 RBM44Q6ZP01 1051 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 NOL8Q76FK4 1167 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-204ENST00000561869 LAS2Q8IYD9 372 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 C16orf71Q8IYS4 520 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 CCDC150Q8NCX0 1101 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 ZNF548Q8NEK5 533 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 OR52L2PQ8NGH6 319 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 BCAS4Q8TDM0 211 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 OVCA2Q8WZ82 227 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 AKAP1Q92667 903 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-204ENST00000561869 CELF1Q92879 486 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 TRMT61AQ96FX7 289 aaKnown RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 ZNF845Q96IR2 970 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 RIPOR3Q96MK2 946 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 NUDT22Q9BRQ3 303 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 RNF26Q9BY78 433 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 CDCP1Q9H5V8 836 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 FSCN3Q9NQT6 498 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 ASNSD1Q9NWL6 643 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 DTNAQ9Y4J8 743 aa2.72□□□□□ -1.97
CHD9-204ENST00000561869 HEMK1Q9Y5R4 338 aaPredicted RBP2.72□□□□□ -1.97
CHD9-204ENST00000561869 SPATA31A5Q5VU36 1347 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 SPATA31A7Q8IWB4 1347 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 CCDC194A0A1B0GVG4 234 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 GXYLT2A0PJZ3 443 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 ZNF814B7Z6K7 855 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 RASA4BC9J798 803 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 RASA4O43374 803 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 TOMM40O96008 361 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 VIPP01282 170 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 MATN1P21941 496 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 MMP8P22894 467 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 EEF1GP26641 437 aaKnown RBP2.71□□□□□ -1.98
CHD9-204ENST00000561869 NDUFS1P28331 727 aa2.71□□□□□ -1.98
CHD9-204ENST00000561869 STAT6P42226 847 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms