RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PIK3CAP42336 1068 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PHKA1P46020 1223 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 BMXP51813 675 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 COPAP53621 1224 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 GRB10Q13322 594 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PPIL2Q13356 520 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 ATP1A4Q13733 1029 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 UBE4AQ14139 1066 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 DCAF6Q58WW2 860 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 TEDDM1Q5T9Z0 273 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 KRT39Q6A163 491 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 CCSAPQ6IQ19 270 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 ZNF790Q6PG37 636 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 CCDC81Q6ZN84 652 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 IDO2Q6ZQW0 420 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 AFAP1L2Q8N4X5 818 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 LSMEM1Q8N8F7 131 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 SIMC1Q8NDZ2 872 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 TOR1AIP2Q8NFQ8 470 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 HCAR2Q8TDS4 363 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 MZB1Q8WU39 189 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 TAMM41Q96BW9 452 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 C12orf43Q96C57 262 aaKnown RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 DNAJC19Q96DA6 116 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 RMND5BQ96G75 393 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 VMP1Q96GC9 406 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 APOPT1Q96IL0 206 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 EGLN2Q96KS0 407 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 ACAP3Q96P50 834 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 SLC4A9Q96Q91 983 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 GCNAQ96QF7 691 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 MTMR9Q96QG7 549 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 RTKNQ9BST9 563 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 BRIP1Q9BX63 1249 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 ANKRD60Q9BZ19 345 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 FRMD8Q9BZ67 464 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 HOXD1Q9GZZ0 328 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 CDH19Q9H159 772 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 GOLPH3Q9H4A6 298 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PDZD7Q9H5P4 517 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 VRTNQ9H8Y1 702 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 HMG20AQ9NP66 347 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 MRGBPQ9NV56 204 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 THAP1Q9NVV9 213 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 TFCP2L1Q9NZI6 479 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 IPO11Q9UI26 975 aaKnown RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 CDH22Q9UJ99 828 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 RIMS3Q9UJD0 308 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 SHOC2Q9UQ13 582 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 WBP11Q9Y2W2 641 aaKnown RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PCDHB4Q9Y5E5 795 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PCDHA8Q9Y5H6 950 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 PCDHA2Q9Y5H9 948 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 LY75O60449 1722 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 MN1Q10571 1320 aaPredicted RBP7.49□□□□□ -1.21
CDH1-203ENST00000561751 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
CDH1-203ENST00000561751 MYH4Q9Y623 1939 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 NPHP3-ACAD11A0A0J9YXS1 232 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 PRSS51A0A1B0GVH4 220 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 GSTTP1A0A1W2PQM5 241 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 ARHGAP42A6NI28 874 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 F5H6K3 240 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 DNALI1O14645 258 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 BET1O15155 118 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 PMM2O15305 246 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 CLOCKO15516 846 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 KLHL41O60662 606 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 NOL3O60936 208 aaKnown RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 USP1O94782 785 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 UGT2B4P06133 528 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 ENO1P06733 434 aaKnown RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 ENO2P09104 434 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 MCF2P10911 925 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 NCAM1P13591 858 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 MYL6BP14649 208 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 FOSL1P15407 271 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 RHOQP17081 205 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 CTRB1P17538 263 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 POLR2CP19387 275 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 COMTP21964 271 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 KLRC2P26717 231 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 MCAMP43121 646 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 AP3M2P53677 418 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 ARID5AQ03989 594 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 PRKCQQ04759 706 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 COASYQ13057 564 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 ZNF211Q13398 564 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 ITPK1Q13572 414 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 KRR1Q13601 381 aaKnown RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 GAS6Q14393 721 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 COL19A1Q14993 1142 aa7.48□□□□□ -1.21
CDH1-203ENST00000561751 NFE2Q16621 373 aaPredicted RBP7.48□□□□□ -1.21
CDH1-203ENST00000561751 INSCQ1MX18 579 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms