RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 MYLK2Q9H1R3 596 aa5.66□□□□□ -1.5
CRNDE-208ENST00000560029 TP63Q9H3D4 680 aaPredicted RBP5.66□□□□□ -1.5
CRNDE-208ENST00000560029 USP29Q9HBJ7 922 aa5.66□□□□□ -1.5
CRNDE-208ENST00000560029 AGO4Q9HCK5 861 aaKnown RBP5.66□□□□□ -1.5
CRNDE-208ENST00000560029 HERC5Q9UII4 1024 aaKnown RBP5.66□□□□□ -1.5
CRNDE-208ENST00000560029 PCDHB2Q9Y5E7 798 aa5.66□□□□□ -1.5
CRNDE-208ENST00000560029 LOC102724159A0A0B4J2E5 919 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 ALADP13716 330 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 VEGFAP15692 232 aaPredicted RBP5.65□□□□□ -1.5
CRNDE-208ENST00000560029 DGKQP52824 942 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 COPB1P53618 953 aaKnown RBP5.65□□□□□ -1.5
CRNDE-208ENST00000560029 SEMA3BQ13214 749 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 POSTNQ15063 836 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 PWP2Q15269 919 aaKnown RBP5.65□□□□□ -1.5
CRNDE-208ENST00000560029 BTBD16Q32M84 506 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 FAM90A2PQ658T7 463 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 DENND2CQ68D51 928 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 JMJD6Q6NYC1 403 aaPredicted RBP5.65□□□□□ -1.5
CRNDE-208ENST00000560029 CEP85Q6P2H3 762 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 SFTPA1Q8IWL2 248 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 NRSN1Q8IZ57 195 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.65□□□□□ -1.5
CRNDE-208ENST00000560029 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 TERB1Q8NA31 727 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 STT3BQ8TCJ2 826 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 MMS19Q96T76 1030 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 TIMP4Q99727 224 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 POLR3GLQ9BT43 218 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 MLXIPQ9HAP2 919 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 SH3BP4Q9P0V3 963 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 VPS4AQ9UN37 437 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 PCDHGB3Q9Y5G1 929 aa5.65□□□□□ -1.5
CRNDE-208ENST00000560029 KAT6AQ92794 2004 aa5.65□□□□□ -1.51
CRNDE-208ENST00000560029 IPO5O00410 1097 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 PRAMEF2O60811 474 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 RPP40O75818 363 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 ACTL6BO94805 426 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 CER1O95813 267 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 TXNL4AP83876 142 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 FOXO1Q12778 655 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 DNASE1L3Q13609 305 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 ZRSR2Q15696 482 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 KRTAP5-11Q6L8G4 156 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 CCDC117Q8IWD4 279 aaPredicted RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 CLASRPQ8N2M8 674 aaKnown RBP5.64□□□□□ -1.51
CRNDE-208ENST00000560029 FAM71DQ8N9W8 422 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 SPATA5Q8NB90 893 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 SLC22A17Q8WUG5 538 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 WDR60Q8WVS4 1066 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 ZBTB9Q96C00 473 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 RTKNQ9BST9 563 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 VPS45Q9NRW7 570 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 PCDHB7Q9Y5E2 793 aa5.64□□□□□ -1.51
CRNDE-208ENST00000560029 KIF28PB7ZC32 967 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 M0QZQ0 153 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 TMIGD3P0DMS9 266 aaPredicted RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 WT1P19544 449 aaPredicted RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 GPD1P21695 349 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 RENBPP51606 427 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 PNLIPRP1P54315 467 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 AP2B1P63010 937 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 GPC5P78333 572 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 CCDC15Q0P6D6 951 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 PRKG1Q13976 671 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 SRSF7Q16629 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 ATPAF1Q5TC12 328 aaPredicted RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 BCDIN3DQ7Z5W3 292 aaKnown RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 C12orf76Q8N812 135 aaPredicted RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 SCAMP5Q8TAC9 235 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 TRAPPC12Q8WVT3 735 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 OVCA2Q8WZ82 227 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 REPS1Q96D71 796 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 DAZAP1Q96EP5 407 aaKnown RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 EDC3Q96F86 508 aaKnown RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
CRNDE-208ENST00000560029 TMEM120AQ9BXJ8 343 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 ASIC5Q9NY37 505 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 TFCP2L1Q9NZI6 479 aa5.63□□□□□ -1.51
CRNDE-208ENST00000560029 CCDC187A0A096LP49 1063 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 HMX3A6NHT5 357 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 TARM1B6A8C7 271 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 PPP6R2O75170 966 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 JTBO76095 146 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 CELA2AP08217 269 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 APEHP13798 732 aaKnown RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 GALNSP34059 522 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 POLE2P56282 527 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 RAE1P78406 368 aaKnown RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 HOXA4Q00056 320 aaPredicted RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 TANGO2Q6ICL3 276 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 LDHAL6AQ6ZMR3 332 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 TRIM72Q6ZMU5 477 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 SLC44A2Q8IWA5 706 aaPredicted RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 MAFAQ8NHW3 353 aaPredicted RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 OTUD7AQ8TE49 926 aaPredicted RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 RUBCNQ92622 972 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 SARAFQ96BY9 339 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms