RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 KLHDC10Q6PID8 442 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FAM183BPQ6ZVS7 135 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 SLFN11Q7Z7L1 901 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FAM228AQ86W67 206 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 WDR49Q8IV35 697 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 SEPT12Q8IYM1 358 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CENPLQ8N0S6 344 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RBM15BQ8NDT2 890 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 APPL2Q8NEU8 664 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TSPAN14Q8NG11 270 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TUBGCP5Q96RT8 1024 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GPAMQ9HCL2 828 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ANKEF1Q9NU02 776 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 NDUFA13Q9P0J0 144 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RABGEF1Q9UJ41 708 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 DDX60Q8IY21 1712 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF536O15090 1300 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CNTNAP4Q9C0A0 1308 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 E5RI56 91 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 M0R2N6 131 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FSCN2O14926 492 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PFDN6O15212 129 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UGT1A9O60656 530 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ZC3H11AO75152 810 aaKnown RBP eCLIP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 DEAF1O75398 565 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PSMD10O75832 226 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 LSM8O95777 96 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CCDC159P0C7I6 412 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GNAZP19086 355 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CNTFP26441 200 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PEX2P28328 305 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 STAT5BP51692 787 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 HMGCS2P54868 508 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TGFB2P61812 414 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PDK2Q15119 407 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 C15orf59Q2T9L4 293 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 XKR3Q5GH77 459 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 EFCAB12Q6NXP0 572 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ARMCX2Q7L311 632 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ACOT1Q86TX2 421 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UNC45BQ8IWX7 931 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 C12orf50Q8NA57 414 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RXFP2Q8WXD0 754 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FAM167AQ96KS9 214 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 WRNIP1Q96S55 665 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 NMUR2Q9GZQ4 415 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CAB39LQ9H9S4 337 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 WDR41Q9HAD4 459 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UGT1A7Q9HAW7 530 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UGT1A10Q9HAW8 530 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UGT1A8Q9HAW9 530 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 SYBUQ9NX95 663 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 AP4B1Q9Y6B7 739 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RPS6KL1Q9Y6S9 549 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CHADO15335 359 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CCDC130P13994 396 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GFAPP14136 432 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 DRG2P55039 364 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CCNA1P78396 465 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MRPS15P82914 257 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 UBE3AQ05086 875 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 BST1Q10588 318 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PDK1Q15118 436 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ZC3H12AQ5D1E8 599 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ARL10Q8N8L6 244 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF280CQ8ND82 737 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PDCD6IPQ8WUM4 868 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CDH19Q9H159 772 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 EFCAB1Q9HAE3 211 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 AVENQ9NQS1 362 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CD274Q9NZQ7 290 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 LNPEPQ9UIQ6 1025 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 AP4E1Q9UPM8 1137 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GOLGA8CPA6NN73 597 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ALBP02768 609 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MMP10P09238 476 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ATP6V1B2P21281 511 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MUTP22033 750 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CCNFP41002 786 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RAD23AP54725 363 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RPL7AP62424 266 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 NFYCQ13952 458 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FASTKQ14296 549 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CSHL1Q14406 222 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 AGKQ53H12 422 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 SPANXN3Q5MJ09 141 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ZBTB49Q6ZSB9 765 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MON1BQ7L1V2 547 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CATSPER4Q7RTX7 472 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TMEM176AQ96HP8 235 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GMCL1Q96IK5 515 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 FAXDC2Q96IV6 333 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 SLC4A5Q9BY07 1137 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 EIF2AQ9BY44 585 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GPRC5DQ9NZD1 345 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 VANGL2Q9ULK5 521 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 AP4S1Q9Y587 144 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 CSDE1O75534 798 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms