RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZFP1Q6P2D0 407 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 ADGRD1Q6QNK2 874 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 ZBTB49Q6ZSB9 765 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 ARCQ7LC44 396 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 GSTCDQ8NEC7 633 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 CPT1BQ92523 772 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 GRIP2Q9C0E4 1043 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 CYP4F12Q9HCS2 524 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 ACOT9Q9Y305 439 aa15.45■□□□□ 0.06
ARHGEF40-207ENST00000556399 MYH6P13533 1939 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 USP1O94782 785 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 MPOP05164 745 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 DSG3P32926 999 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 ALDH1A3P47895 512 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 TGFB2P61812 414 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CDC26Q8NHZ8 85 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CALML6Q8TD86 181 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 KCNA2P16389 499 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 ME2P23368 584 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 TSPY1Q01534 308 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 PRKAA1Q13131 559 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 EFCAB3Q8N7B9 438 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 RBM15BQ8NDT2 890 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 NKD2Q969F2 451 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 LENG9Q96B70 501 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CLIC5Q9NZA1 410 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 PACSIN3Q9UKS6 424 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 PSMA4P25789 261 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 RGS2P41220 211 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CDK7P50613 346 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 PKNOX1P55347 436 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 FKBP1AP62942 108 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CRADDP78560 199 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 WASHC5Q12768 1159 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 RFWD3Q6PCD5 774 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 LPCAT2Q7L5N7 544 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 VSIG10LQ86VR7 867 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CLPTM1LQ96KA5 538 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 RNF157Q96PX1 679 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 CPNE1Q99829 537 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 NCKIPSDQ9NZQ3 722 aa15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 BAZ2AQ9UIF9 1905 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-207ENST00000556399 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 SUPT7LO94864 414 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ETS2P15036 469 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 MLH1P40692 756 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 NR2C2P49116 596 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 BCAT1P54687 386 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ZC3H3Q8IXZ2 948 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 SLCO2A1Q92959 643 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 FAR2Q96K12 515 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 UNKQ9C0B0 810 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 DDIT4Q9NX09 232 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 C16orf96A6NNT2 1141 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 PMPCBO75439 489 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 TMCC1O94876 653 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 MYL3P08590 195 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 RARBP10826 455 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 TNFSF9P41273 254 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ZNF143P52747 638 aaPredicted RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ANKRD22Q5VYY1 191 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 FAM83AQ86UY5 434 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 JOSD2Q8TAC2 188 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 COMMD3-BMI1R4GMX3 469 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 E5RI56 91 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 RNF103O00237 685 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 LYPLA1O75608 230 aaPredicted RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 PCYT1AP49585 367 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 AGKQ53H12 422 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 AGAP9Q5VTM2 703 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 PDCD6IPQ8WUM4 868 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 LRRN4Q8WUT4 740 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 C10orf82Q8WW14 230 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 TSR3Q9UJK0 312 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 AP4S1Q9Y587 144 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 KDM1AO60341 852 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ERVK-10P10266 1014 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 CCNB1P14635 433 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 PPIDQ08752 370 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 KRT72Q14CN4 511 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 DIS3LQ8TF46 1054 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 ZNF570Q96NI8 536 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 UBP1Q9NZI7 540 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 PCDHA11Q9Y5I1 949 aa15.43■□□□□ 0.06
ARHGEF40-207ENST00000556399 BIRC5O15392 142 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 CDKN2BP42772 138 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 IMPG1Q17R60 797 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 SV2CQ496J9 727 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 ZNF772Q68DY9 489 aaPredicted RBP15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 AAGABQ6PD74 315 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 SEC14L1Q92503 715 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 ST6GALNAC4Q9H4F1 302 aa15.42■□□□□ 0.06
ARHGEF40-207ENST00000556399 RABGEF1Q9UJ41 708 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms